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    THOC2 THO complex subunit 2 [ Rhinolophus ferrumequinum (greater horseshoe bat) ]

    Gene ID: 117021479, updated on 30-Mar-2024

    Summary

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    Gene symbol
    THOC2
    Gene description
    THO complex subunit 2
    See related
    EnsemblRapid:ENSRFEG00010002030
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rhinolophus ferrumequinum
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus
    Also known as
    Tho2
    Orthologs
    human mouse all
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    Genomic context

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    See THOC2 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    40
    Annotation release Status Assembly Chr Location
    RS_2023_02 current mRhiFer1_v1.p (GCF_004115265.2) X NC_046284.1 (33441541..33575328)

    Chromosome X - NC_046284.1Genomic Context describing neighboring genes Neighboring gene partitioning defective 6 homolog beta-like Neighboring gene X-linked inhibitor of apoptosis Neighboring gene elongation factor 1-alpha 1-like Neighboring gene tyrosine-protein kinase Fer-like Neighboring gene E3 SUMO-protein ligase PIAS1-like Neighboring gene elongation factor 1-alpha 1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_046284.1 Chromosome X Reference mRhiFer1_v1.p

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA export from nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of THO complex part of transcription export complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    THO complex subunit 2
    Names
    THO complex 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_004115265.2-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mRhiFer1_v1.p

    Genomic

    1. NC_046284.1 Reference mRhiFer1_v1.p

      Range
      33441541..33575328
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_033104671.1 → XP_032960562.1  THO complex subunit 2 isoform X1

      UniProtKB/Swiss-Prot
      B2KI97
      Conserved Domains (5) summary
      PTZ00121
      Location:1306 → 1615
      PTZ00121; MAEBL; Provisional
      TIGR01642
      Location:1476 → 1587
      U2AF_lg; U2 snRNP auxilliary factor, large subunit, splicing factor
      pfam11262
      Location:878 → 1177
      Tho2; Transcription factor/nuclear export subunit protein 2
      pfam11732
      Location:568 → 646
      Thoc2; Transcription- and export-related complex subunit
      pfam16134
      Location:10 → 566
      THOC2_N; THO complex subunit 2 N-terminus

    2. XM_033104682.1 → XP_032960573.1  THO complex subunit 2 isoform X3

      UniProtKB/Swiss-Prot
      B2KI97
      Conserved Domains (5) summary
      PTZ00121
      Location:1306 → 1619
      PTZ00121; MAEBL; Provisional
      TIGR01642
      Location:1476 → 1587
      U2AF_lg; U2 snRNP auxilliary factor, large subunit, splicing factor
      pfam11262
      Location:878 → 1177
      Tho2; Transcription factor/nuclear export subunit protein 2
      pfam11732
      Location:568 → 646
      Thoc2; Transcription- and export-related complex subunit
      pfam16134
      Location:10 → 566
      THOC2_N; THO complex subunit 2 N-terminus

    3. XM_033104660.1 → XP_032960551.1  THO complex subunit 2 isoform X1

      UniProtKB/Swiss-Prot
      B2KI97
      Conserved Domains (5) summary
      PTZ00121
      Location:1306 → 1615
      PTZ00121; MAEBL; Provisional
      TIGR01642
      Location:1476 → 1587
      U2AF_lg; U2 snRNP auxilliary factor, large subunit, splicing factor
      pfam11262
      Location:878 → 1177
      Tho2; Transcription factor/nuclear export subunit protein 2
      pfam11732
      Location:568 → 646
      Thoc2; Transcription- and export-related complex subunit
      pfam16134
      Location:10 → 566
      THOC2_N; THO complex subunit 2 N-terminus

    4. XM_033104676.1 → XP_032960567.1  THO complex subunit 2 isoform X2

      UniProtKB/Swiss-Prot
      B2KI97
      Conserved Domains (5) summary
      PTZ00121
      Location:1305 → 1614
      PTZ00121; MAEBL; Provisional
      TIGR01642
      Location:1475 → 1586
      U2AF_lg; U2 snRNP auxilliary factor, large subunit, splicing factor
      pfam11262
      Location:878 → 1177
      Tho2; Transcription factor/nuclear export subunit protein 2
      pfam11732
      Location:568 → 646
      Thoc2; Transcription- and export-related complex subunit
      pfam16134
      Location:10 → 566
      THOC2_N; THO complex subunit 2 N-terminus

    5. XM_033104689.1 → XP_032960580.1  THO complex subunit 2 isoform X4

      UniProtKB/Swiss-Prot
      B2KI97
      Conserved Domains (5) summary
      PTZ00121
      Location:1302 → 1611
      PTZ00121; MAEBL; Provisional
      TIGR01642
      Location:1472 → 1583
      U2AF_lg; U2 snRNP auxilliary factor, large subunit, splicing factor
      pfam11262
      Location:874 → 1173
      Tho2; Transcription factor/nuclear export subunit protein 2
      pfam11732
      Location:568 → 642
      Thoc2; Transcription- and export-related complex subunit
      pfam16134
      Location:10 → 566
      THOC2_N; THO complex subunit 2 N-terminus

    6. XM_033104700.1 → XP_032960591.1  THO complex subunit 2 isoform X5

      UniProtKB/Swiss-Prot
      B2KI97
      Conserved Domains (5) summary
      PTZ00121
      Location:1301 → 1610
      PTZ00121; MAEBL; Provisional
      TIGR01642
      Location:1471 → 1582
      U2AF_lg; U2 snRNP auxilliary factor, large subunit, splicing factor
      pfam11262
      Location:874 → 1173
      Tho2; Transcription factor/nuclear export subunit protein 2
      pfam11732
      Location:568 → 642
      Thoc2; Transcription- and export-related complex subunit
      pfam16134
      Location:10 → 566
      THOC2_N; THO complex subunit 2 N-terminus

    7. XM_033104737.1 → XP_032960628.1  THO complex subunit 2 isoform X8

      UniProtKB/Swiss-Prot
      B2KI97
      UniProtKB/TrEMBL
      A0A671DXE4
      Conserved Domains (5) summary
      PTZ00121
      Location:1291 → 1593
      PTZ00121; MAEBL; Provisional
      TIGR01642
      Location:1445 → 1556
      U2AF_lg; U2 snRNP auxilliary factor, large subunit, splicing factor
      pfam11262
      Location:874 → 1173
      Tho2; Transcription factor/nuclear export subunit protein 2
      pfam11732
      Location:568 → 642
      Thoc2; Transcription- and export-related complex subunit
      pfam16134
      Location:10 → 566
      THOC2_N; THO complex subunit 2 N-terminus

    8. XM_033104720.1 → XP_032960611.1  THO complex subunit 2 isoform X7

      UniProtKB/Swiss-Prot
      B2KI97
      Conserved Domains (5) summary
      PTZ00121
      Location:1295 → 1597
      PTZ00121; MAEBL; Provisional
      TIGR01642
      Location:1449 → 1560
      U2AF_lg; U2 snRNP auxilliary factor, large subunit, splicing factor
      pfam11262
      Location:878 → 1177
      Tho2; Transcription factor/nuclear export subunit protein 2
      pfam11732
      Location:568 → 646
      Thoc2; Transcription- and export-related complex subunit
      pfam16134
      Location:10 → 566
      THOC2_N; THO complex subunit 2 N-terminus

    9. XM_033104711.1 → XP_032960602.1  THO complex subunit 2 isoform X6

      UniProtKB/Swiss-Prot
      B2KI97
      Related
      ENSRFEP00010044462.1, ENSRFET00010047915.1
      Conserved Domains (5) summary
      PTZ00121
      Location:1301 → 1585
      PTZ00121; MAEBL; Provisional
      TIGR01642
      Location:1445 → 1556
      U2AF_lg; U2 snRNP auxilliary factor, large subunit, splicing factor
      pfam11262
      Location:874 → 1173
      Tho2; Transcription factor/nuclear export subunit protein 2
      pfam11732
      Location:568 → 642
      Thoc2; Transcription- and export-related complex subunit
      pfam16134
      Location:10 → 566
      THOC2_N; THO complex subunit 2 N-terminus

    10. XM_033104728.1 → XP_032960619.1  THO complex subunit 2 isoform X8

      UniProtKB/Swiss-Prot
      B2KI97
      UniProtKB/TrEMBL
      A0A671DXE4
      Related
      ENSRFEP00010002999.2, ENSRFET00010003300.2
      Conserved Domains (5) summary
      PTZ00121
      Location:1291 → 1593
      PTZ00121; MAEBL; Provisional
      TIGR01642
      Location:1445 → 1556
      U2AF_lg; U2 snRNP auxilliary factor, large subunit, splicing factor
      pfam11262
      Location:874 → 1173
      Tho2; Transcription factor/nuclear export subunit protein 2
      pfam11732
      Location:568 → 642
      Thoc2; Transcription- and export-related complex subunit
      pfam16134
      Location:10 → 566
      THOC2_N; THO complex subunit 2 N-terminus

    11. XM_033104744.1 → XP_032960635.1  THO complex subunit 2 isoform X9

      UniProtKB/Swiss-Prot
      B2KI97
      Conserved Domains (4) summary
      TIGR01642
      Location:1444 → 1555
      U2AF_lg; U2 snRNP auxilliary factor, large subunit, splicing factor
      pfam11262
      Location:874 → 1173
      Tho2; Transcription factor/nuclear export subunit protein 2
      pfam11732
      Location:568 → 642
      Thoc2; Transcription- and export-related complex subunit
      pfam16134
      Location:10 → 566
      THOC2_N; THO complex subunit 2 N-terminus
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B2KI97.1 GenPept UniProtKB/Swiss-Prot:B2KI97

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