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    PNO1 partner of NOB1 homolog [ Tyto alba (common barn owl) ]

    Gene ID: 104355891, updated on 26-Nov-2024

    Summary

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    Gene symbol
    PNO1
    Gene description
    partner of NOB1 homolog
    Locus tag
    N341_07382
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tyto alba
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Tytonidae; Tyto
    Orthologs
    human mouse all
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    Genomic context

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    See PNO1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    102 current T.alba_DEE_v4.0 (GCF_018691265.1) Unplaced Scaffold NW_024881296.1 (2756301..2761620)
    101 previous assembly genome_assembly_l500 (GCF_902150015.1) Unplaced Scaffold NW_022669928.1 (168667..173985, complement)

    NW_024881296.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116961692 Neighboring gene dynein axonemal assembly factor 10 Neighboring gene protein phosphatase 3 regulatory subunit B, alpha Neighboring gene pleckstrin Neighboring gene cannabinoid receptor interacting protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA-binding protein PNO1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Tyto alba Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference T.alba_DEE_v4.0

    Genomic

    1. NW_024881296.1 Reference T.alba_DEE_v4.0

      Range
      2756301..2761620
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032993500.2 → XP_032849391.1  RNA-binding protein PNO1

      Conserved Domains (2) summary
      cd22391
      Location:61 → 139
      KH-I_PNO1_rpt1; first type I K homology (KH) RNA-binding domain found in partner of NOB1 (PNO1) and similar proteins
      cd22392
      Location:141 → 236
      KH-I_PNO1_rpt2; second type I K homology (KH) RNA-binding domain found in partner of NOB1 (PNO1) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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