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    Rnf216 ring finger protein 216 [ Rattus rattus (black rat) ]

    Gene ID: 116885971, updated on 18-Mar-2024

    Summary

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    Gene symbol
    Rnf216
    Gene description
    ring finger protein 216
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus rattus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Orthologs
    human mouse all
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    Genomic context

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    See Rnf216 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    100 current Rrattus_CSIRO_v1 (GCF_011064425.1) 16 NC_046169.1 (10031196..10153781)

    Chromosome 16 - NC_046169.1Genomic Context describing neighboring genes Neighboring gene RB associated KRAB zinc finger Neighboring gene olfactory receptor 10AC1-like Neighboring gene fascin actin-bundling protein 1 Neighboring gene actin beta

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_046169.1 Chromosome 16 Reference Rrattus_CSIRO_v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase RNF216

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Rattus rattus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Rrattus_CSIRO_v1 Primary Assembly

    Genomic

    1. NC_046169.1 Reference Rrattus_CSIRO_v1 Primary Assembly

      Range
      10031196..10153781
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032887310.1 → XP_032743201.1  E3 ubiquitin-protein ligase RNF216 isoform X1

      Conserved Domains (2) summary
      cd16630
      Location:558 → 614
      RING-HC_RBR_RNF216; RING finger, HC subclass, found in RING finger protein 216 (RNF216) and similar proteins
      pfam01485
      Location:700 → 750
      IBR; IBR domain, a half RING-finger domain

    2. XM_032887309.1 → XP_032743200.1  E3 ubiquitin-protein ligase RNF216 isoform X1

      Conserved Domains (2) summary
      cd16630
      Location:558 → 614
      RING-HC_RBR_RNF216; RING finger, HC subclass, found in RING finger protein 216 (RNF216) and similar proteins
      pfam01485
      Location:700 → 750
      IBR; IBR domain, a half RING-finger domain

    3. XM_032887312.1 → XP_032743203.1  E3 ubiquitin-protein ligase RNF216 isoform X2

      Conserved Domains (2) summary
      cd16630
      Location:501 → 557
      RING-HC_RBR_RNF216; RING finger, HC subclass, found in RING finger protein 216 (RNF216) and similar proteins
      pfam01485
      Location:643 → 693
      IBR; IBR domain, a half RING-finger domain

    4. XM_032887311.1 → XP_032743202.1  E3 ubiquitin-protein ligase RNF216 isoform X1

      Conserved Domains (2) summary
      cd16630
      Location:558 → 614
      RING-HC_RBR_RNF216; RING finger, HC subclass, found in RING finger protein 216 (RNF216) and similar proteins
      pfam01485
      Location:700 → 750
      IBR; IBR domain, a half RING-finger domain
    Nucleotide Protein
    Heading Accession and Version

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