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    C15H18orf32 chromosome 15 C18orf32 homolog [ Rattus rattus (black rat) ]

    Gene ID: 116884495, updated on 18-Mar-2024

    Summary

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    Gene symbol
    C15H18orf32
    Gene description
    chromosome 15 C18orf32 homolog
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus rattus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Orthologs
    human mouse all
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    Genomic context

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    See C15H18orf32 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current Rrattus_CSIRO_v1 (GCF_011064425.1) 15 NC_046168.1 (56970176..56978743, complement)

    Chromosome 15 - NC_046168.1Genomic Context describing neighboring genes Neighboring gene SMAD family member 7 Neighboring gene dymeclin Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA SNORD58 Neighboring gene small nucleolar RNA SNORD58 Neighboring gene ribosomal protein L17

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_046168.1 Chromosome 15 Reference Rrattus_CSIRO_v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in positive regulation of canonical NF-kappaB signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    UPF0729 protein C18orf32 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Rattus rattus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Rrattus_CSIRO_v1 Primary Assembly

    Genomic

    1. NC_046168.1 Reference Rrattus_CSIRO_v1 Primary Assembly

      Range
      56970176..56978743 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032885617.1 → XP_032741508.1  UPF0729 protein C18orf32 homolog

      Conserved Domains (1) summary
      pfam14975
      Location:2 → 38
      DUF4512; Domain of unknown function (DUF4512)

    2. XM_032885618.1 → XP_032741509.1  UPF0729 protein C18orf32 homolog

      Conserved Domains (1) summary
      pfam14975
      Location:2 → 38
      DUF4512; Domain of unknown function (DUF4512)
    Nucleotide Protein
    Heading Accession and Version

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