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    L3MBTL2 L3MBTL histone methyl-lysine binding protein 2 [ Chelonoidis abingdonii (Abingdon island giant tortoise) ]

    Gene ID: 116829026, updated on 18-Mar-2024

    Summary

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    Gene symbol
    L3MBTL2
    Gene description
    L3MBTL histone methyl-lysine binding protein 2
    See related
    Ensembl:ENSCABG00000022907
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chelonoidis abingdonii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Testudinidae; Chelonoidis
    Orthologs
    human mouse all
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    Genomic context

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    See L3MBTL2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    100 current ASM359739v1 (GCF_003597395.1) Unplaced Scaffold NW_022641111.1 (1070021..1097478, complement)

    NW_022641111.1Genomic Context describing neighboring genes Neighboring gene chondroadherin-like Neighboring gene chondroadherin like Neighboring gene uncharacterized LOC116829042 Neighboring gene E1A binding protein p300

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_022641111 Unplaced Scaffold Reference ASM359739v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables methylated histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lethal(3)malignant brain tumor-like protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Chelonoidis abingdonii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM359739v1

    Genomic

    1. NW_022641111.1 Reference ASM359739v1

      Range
      1070021..1097478 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032787643.1 → XP_032643534.1  lethal(3)malignant brain tumor-like protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8C0JEH3
      Related
      ENSCABP00000031352.1, ENSCABT00000034368.1
      Conserved Domains (2) summary
      smart00561
      Location:527 → 619
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      pfam02820
      Location:448 → 519
      MBT; mbt repeat

    2. XM_032787629.1 → XP_032643520.1  lethal(3)malignant brain tumor-like protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0JEH3
      Related
      ENSCABP00000031351.1, ENSCABT00000034367.1
      Conserved Domains (2) summary
      smart00561
      Location:528 → 620
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      pfam02820
      Location:449 → 520
      MBT; mbt repeat

    3. XM_032787649.1 → XP_032643540.1  lethal(3)malignant brain tumor-like protein 2 isoform X3

      UniProtKB/TrEMBL
      A0A8C0JEH3
      Related
      ENSCABP00000031354.1, ENSCABT00000034370.1
      Conserved Domains (2) summary
      smart00561
      Location:506 → 598
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      pfam02820
      Location:427 → 498
      MBT; mbt repeat

    RNA

    1. XR_004374651.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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