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    ABCC5 ATP binding cassette subfamily C member 5 [ Phocoena sinus (vaquita) ]

    Gene ID: 116752808, updated on 18-Mar-2024

    Summary

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    Gene symbol
    ABCC5
    Gene description
    ATP binding cassette subfamily C member 5
    See related
    Ensembl:ENSPSNG00000002555
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Phocoena sinus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Phocoena
    Orthologs
    human mouse all
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    Genomic context

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    See ABCC5 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    32
    Annotation release Status Assembly Chr Location
    100 current mPhoSin1.pri (GCF_008692025.1) 4 NC_045766.1 (61122692..61211186, complement)

    Chromosome 4 - NC_045766.1Genomic Context describing neighboring genes Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene presenilin associated rhomboid like Neighboring gene cytochrome P450 2J6-like Neighboring gene 40S ribosomal protein S15a-like Neighboring gene 5-hydroxytryptamine receptor 3C-like Neighboring gene 5-hydroxytryptamine receptor 3C-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045766.1 Chromosome 4 Reference mPhoSin1.pri

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ABC-type transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    multidrug resistance-associated protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Phocoena sinus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mPhoSin1.pri

    Genomic

    1. NC_045766.1 Reference mPhoSin1.pri

      Range
      61122692..61211186 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032629755.1 → XP_032485646.1  multidrug resistance-associated protein 5 isoform X3

      UniProtKB/TrEMBL
      A0A8C9BBF5
      Conserved Domains (1) summary
      TIGR00957
      Location:100 → 1306
      MRP_assoc_pro; multi drug resistance-associated protein (MRP)

    2. XM_032629758.1 → XP_032485649.1  multidrug resistance-associated protein 5 isoform X5

      UniProtKB/TrEMBL
      A0A8C9BBF5
      Conserved Domains (3) summary
      TIGR00957
      Location:100 → 883
      MRP_assoc_pro; multi drug resistance-associated protein (MRP)
      cd03244
      Location:912 → 1132
      ABCC_MRP_domain2; ATP-binding cassette domain 2 of multidrug resistance-associated protein
      cd18592
      Location:181 → 467
      ABC_6TM_MRP5_8_9_D1; Six-transmembrane helical domain 1 (TMD1) of multidrug resistance-associated proteins (MRPs) 5, 8, and 9

    3. XM_032629753.1 → XP_032485644.1  multidrug resistance-associated protein 5 isoform X1

      UniProtKB/TrEMBL
      A0A8C9B1F4, A0A8C9BBF5
      Related
      ENSPSNP00000003396.1, ENSPSNT00000003897.1
      Conserved Domains (1) summary
      PLN03130
      Location:100 → 1425
      PLN03130; ABC transporter C family member; Provisional

    4. XM_032629756.1 → XP_032485647.1  multidrug resistance-associated protein 5 isoform X4

      UniProtKB/TrEMBL
      A0A8C9BBF5
      Conserved Domains (1) summary
      PLN03130
      Location:18 → 1169
      PLN03130; ABC transporter C family member; Provisional

    5. XM_032629759.1 → XP_032485650.1  multidrug resistance-associated protein 5 isoform X6

      Conserved Domains (1) summary
      PLN03130
      Location:103 → 953
      PLN03130; ABC transporter C family member; Provisional

    6. XM_032629754.1 → XP_032485645.1  multidrug resistance-associated protein 5 isoform X2

      UniProtKB/TrEMBL
      A0A8C9BBF5
      Conserved Domains (1) summary
      PLN03130
      Location:79 → 1404
      PLN03130; ABC transporter C family member; Provisional

    7. XM_032629757.1 → XP_032485648.1  multidrug resistance-associated protein 5 isoform X4

      UniProtKB/TrEMBL
      A0A8C9BBF5
      Conserved Domains (1) summary
      PLN03130
      Location:18 → 1169
      PLN03130; ABC transporter C family member; Provisional

    8. XM_032629762.1 → XP_032485653.1  multidrug resistance-associated protein 5 isoform X7

      UniProtKB/TrEMBL
      A0A8C9B557
      Conserved Domains (1) summary
      PLN03232
      Location:100 → 156
      PLN03232; ABC transporter C family member; Provisional

    9. XM_032629761.1 → XP_032485652.1  multidrug resistance-associated protein 5 isoform X7

      UniProtKB/TrEMBL
      A0A8C9B557
      Conserved Domains (1) summary
      PLN03232
      Location:100 → 156
      PLN03232; ABC transporter C family member; Provisional

    10. XM_032629760.1 → XP_032485651.1  multidrug resistance-associated protein 5 isoform X7

      UniProtKB/TrEMBL
      A0A8C9B557
      Related
      ENSPSNP00000003436.1, ENSPSNT00000003945.1
      Conserved Domains (1) summary
      PLN03232
      Location:100 → 156
      PLN03232; ABC transporter C family member; Provisional

    11. XM_032629763.1 → XP_032485654.1  multidrug resistance-associated protein 5 isoform X7

      UniProtKB/TrEMBL
      A0A8C9B557
      Related
      ENSPSNP00000003443.1, ENSPSNT00000003952.1
      Conserved Domains (1) summary
      PLN03232
      Location:100 → 156
      PLN03232; ABC transporter C family member; Provisional
    Nucleotide Protein
    Heading Accession and Version

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