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    PCBP4 poly(rC) binding protein 4 [ Camelus ferus (Wild Bactrian camel) ]

    Gene ID: 102511133, updated on 10-Mar-2024

    Summary

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    Gene symbol
    PCBP4
    Gene description
    poly(rC) binding protein 4
    See related
    EnsemblRapid:ENSCFEG00005021905
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Camelus ferus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
    Orthologs
    human mouse all
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    Genomic context

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    See PCBP4 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    102 current BCGSAC_Cfer_1.0 (GCF_009834535.1) 17 NC_045712.1 (23986163..24006869)
    101 previous assembly CB1 (GCF_000311805.1) Unplaced Scaffold NW_006210636.1 (55941..59822, complement)

    Chromosome 17 - NC_045712.1Genomic Context describing neighboring genes Neighboring gene aminoacylase-1 Neighboring gene ribosomal protein L29 Neighboring gene abhydrolase domain containing 14A Neighboring gene G protein-coupled receptor 62 Neighboring gene poly(ADP-ribose) polymerase family member 3 Neighboring gene ribosomal RNA processing 9, U3 small nucleolar RNA binding protein Neighboring gene transfer RNA methionine (anticodon CAU)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    poly(rC)-binding protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Camelus ferus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference BCGSAC_Cfer_1.0 Primary Assembly

    Genomic

    1. NC_045712.1 Reference BCGSAC_Cfer_1.0 Primary Assembly

      Range
      23986163..24006869
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032458374.1 → XP_032314265.1  poly(rC)-binding protein 4 isoform X4

      UniProtKB/TrEMBL
      A0A8B8RAI9, S9X8H6
      Conserved Domains (4) summary
      COG0596
      Location:93 → 295
      MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]
      cd22517
      Location:332 → 401
      KH-I_PCBP4_rpt1; first type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
      cd22520
      Location:416 → 487
      KH-I_PCBP4_rpt2; second type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
      cd22523
      Location:557 → 624
      KH-I_PCBP4_rpt3; third type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins

    2. XM_032458371.1 → XP_032314262.1  poly(rC)-binding protein 4 isoform X1

      UniProtKB/TrEMBL
      A0A8B8R8J6
      Conserved Domains (4) summary
      COG0596
      Location:93 → 295
      MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]
      cd22517
      Location:332 → 401
      KH-I_PCBP4_rpt1; first type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
      cd22520
      Location:416 → 487
      KH-I_PCBP4_rpt2; second type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
      cd22523
      Location:557 → 623
      KH-I_PCBP4_rpt3; third type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins

    3. XM_032458372.1 → XP_032314263.1  poly(rC)-binding protein 4 isoform X2

      UniProtKB/TrEMBL
      A0A8B8R8E6
      Conserved Domains (4) summary
      COG0596
      Location:93 → 295
      MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]
      cd22517
      Location:332 → 401
      KH-I_PCBP4_rpt1; first type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
      cd22520
      Location:416 → 487
      KH-I_PCBP4_rpt2; second type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
      cd22523
      Location:556 → 622
      KH-I_PCBP4_rpt3; third type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins

    4. XM_032458373.1 → XP_032314264.1  poly(rC)-binding protein 4 isoform X3

      UniProtKB/TrEMBL
      A0A8B8RB78, S9X8H6
      Conserved Domains (4) summary
      COG0596
      Location:93 → 295
      MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]
      cd22517
      Location:332 → 401
      KH-I_PCBP4_rpt1; first type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
      cd22520
      Location:416 → 487
      KH-I_PCBP4_rpt2; second type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
      cd22523
      Location:556 → 623
      KH-I_PCBP4_rpt3; third type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins

    5. XM_032458376.1 → XP_032314267.1  poly(rC)-binding protein 4 isoform X6

      UniProtKB/TrEMBL
      A0A8B8R8K0
      Conserved Domains (2) summary
      PLN02679
      Location:240 → 292
      PLN02679; hydrolase, alpha/beta fold family protein
      COG0596
      Location:93 → 222
      MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]

    6. XM_032458375.1 → XP_032314266.1  poly(rC)-binding protein 4 isoform X5

      UniProtKB/TrEMBL
      A0A8B8R8E9
      Related
      ENSCFEP00005036939.1, ENSCFET00005040948.1
      Conserved Domains (3) summary
      cd22517
      Location:17 → 86
      KH-I_PCBP4_rpt1; first type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
      cd22520
      Location:101 → 172
      KH-I_PCBP4_rpt2; second type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
      cd22523
      Location:241 → 308
      KH-I_PCBP4_rpt3; third type I K homology (KH) RNA-binding domain found in poly(rC)-binding protein 4 (PCBP4) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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