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    CRTAM cytotoxic and regulatory T cell molecule [ Aythya fuligula (tufted duck) ]

    Gene ID: 116497964, updated on 25-Jun-2024

    Summary

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    Gene symbol
    CRTAM
    Gene description
    cytotoxic and regulatory T cell molecule
    See related
    EnsemblRapid:ENSAFUG00000003767
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Aythya fuligula
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Aythyinae; Aythya
    Orthologs
    human mouse all
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    Genomic context

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    See CRTAM in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    100 current bAytFul2.pri (GCF_009819795.1) 22 NC_045580.1 (5032045..5045696)

    Chromosome 22 - NC_045580.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116497855 Neighboring gene ubiquitin associated and SH3 domain containing B Neighboring gene junctional cadherin complex regulator Neighboring gene brain specific homeobox

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045580.1 Chromosome 22 Reference bAytFul2.pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables signaling receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell recognition IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in detection of tumor cell IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytotoxic and regulatory T-cell molecule

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Aythya fuligula Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bAytFul2.pri Primary Assembly

    Genomic

    1. NC_045580.1 Reference bAytFul2.pri Primary Assembly

      Range
      5032045..5045696
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032202058.1 → XP_032057949.1  cytotoxic and regulatory T-cell molecule

      UniProtKB/TrEMBL
      A0A6J3E4A2
      Related
      ENSAFUP00000005118.1, ENSAFUT00000006385.1
      Conserved Domains (2) summary
      cd00096
      Location:25 → 31
      Ig; Ig strand A' [structural motif]
      cl11960
      Location:25 → 115
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

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