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    LOC116463211 estrogen receptor [ Hylobates moloch (silvery gibbon) ]

    Gene ID: 116463211, updated on 19-Jun-2024

    Summary

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    Gene symbol
    LOC116463211
    Gene description
    estrogen receptor
    See related
    EnsemblRapid:ENSHMOG00010003402
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Hylobates moloch
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Hylobates
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    Genomic context

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    See LOC116463211 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_07 current HMol_V3 (GCF_009828535.3) Unplaced Scaffold NW_026652304.1 (1524530..1835670, complement)
    100 previous assembly HMol (GCF_009828535.1) Unplaced Scaffold NW_022454877.1 (1524530..1960828, complement)

    NW_026652304.1Genomic Context describing neighboring genes Neighboring gene myc target protein 1 Neighboring gene nesprin-1 Neighboring gene damage-control phosphatase ARMT1 Neighboring gene U6 spliceosomal RNA Neighboring gene required for meiotic nuclear division protein 1 homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear estrogen receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables steroid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in steroid hormone receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    estrogen receptor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009828535.3-RS_2023_07

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HMol_V3

    Genomic

    1. NW_026652304.1 Reference HMol_V3

      Range
      1524530..1835670 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_058434502.1 → XP_058290485.1  estrogen receptor isoform X3

    2. XM_032146206.2 → XP_032002097.1  estrogen receptor isoform X1

      Related
      ENSHMOP00010003882.1, ENSHMOT00010005170.1
      Conserved Domains (4) summary
      cd06949
      Location:310 → 547
      NR_LBD_ER; Ligand binding domain of Estrogen receptor, which are activated by the hormone 17beta-estradiol (estrogen)
      cd07171
      Location:180 → 261
      NR_DBD_ER; DNA-binding domain of estrogen receptors (ER) is composed of two C4-type zinc fingers
      pfam02159
      Location:42 → 181
      Oest_recep; Oestrogen receptor
      pfam12743
      Location:556 → 595
      ESR1_C; Oestrogen-type nuclear receptor final C-terminal

    3. XM_058434501.1 → XP_058290484.1  estrogen receptor isoform X2

    4. XM_058434503.1 → XP_058290486.1  estrogen receptor isoform X4

    Nucleotide Protein
    Heading Accession and Version

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