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    GT18 glycosyltransferase 18 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836343, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GT18
    Official Full Name
    glycosyltransferase 18
    Primary source
    TAIR:AT5G62220
    Locus tag
    AT5G62220
    See related
    Araport:AT5G62220
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATGT18; glycosyltransferase 18; MMI9.5; MMI9_5; XLT2; Xyloglucan L-side chain galactosylTransferase position 2
    Summary
    Encodes a Golgi apparatus-localized galactosyltransferase involved in galactosyl-substitution of xyloglucan at position 2.
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    Genomic context

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    See GT18 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (24988214..24990331, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Embryo-specific protein 3, (ATS3) Neighboring gene Embryo-specific protein 3, (ATS3) Neighboring gene ncRNA Neighboring gene ERECTA-like 1 Neighboring gene Cell cycle regulated microtubule associated protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. RNA-Seq analysis of developing nasturtium seeds (Tropaeolum majus): identification and characterization of an additional galactosyltransferase involved in xyloglucan biosynthesis. Jensen JK, et al. Mol Plant, 2012 Sep. PMID 22474179, Free PMC Article
    2. Galactose-depleted xyloglucan is dysfunctional and leads to dwarfism in Arabidopsis. Kong Y, et al. Plant Physiol, 2015 Apr. PMID 25673778, Free PMC Article
    3. Protein-protein interactions among xyloglucan-synthesizing enzymes and formation of Golgi-localized multiprotein complexes. Chou YH, et al. Plant Cell Physiol, 2015 Feb. PMID 25392066
    4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_125616.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables galactosyltransferase activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within xyloglucan biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    glycosyltransferase 18
    NP_201028.1
    • glycosyltransferase 18 (GT18); FUNCTIONS IN: catalytic activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1); Has 691 Blast hits to 690 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 667; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      24988214..24990331 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125616.2 → NP_201028.1  glycosyltransferase 18 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201028.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4K6F1, Q9LVB4
      UniProtKB/TrEMBL
      A0A178UBL9, A0A5S9YGI4, A0A654GD91
      Conserved Domains (1) summary
      pfam03016
      Location:117 → 449
      Exostosin; Exostosin family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4K6F1.1

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