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    LOC120146610 oxysterol-binding protein-related protein 1C-like [ Hibiscus syriacus ]

    Gene ID: 120146610, updated on 11-Apr-2024

    Summary

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    Gene symbol
    LOC120146610
    Gene description
    oxysterol-binding protein-related protein 1C-like
    Locus tag
    F3Y22_tig00110930pilonHSYRG00166
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Hibiscus syriacus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Hibiscus
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    Genomic context

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    See LOC120146610 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current ASM638163v2 (GCF_006381635.1) Unplaced Scaffold NW_024062917.1 (982793..991299, complement)

    NW_024062917.1Genomic Context describing neighboring genes Neighboring gene transcriptional corepressor SEUSS-like Neighboring gene ABC transporter G family member 22-like Neighboring gene vacuolar protein sorting-associated protein 45 homolog Neighboring gene uncharacterized protein C57A10.07-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024062917 Unplaced Scaffold Reference ASM638163v2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sterol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    oxysterol-binding protein-related protein 1C-like
    Names
    Oxysterol-binding protein-related protein 1C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Hibiscus syriacus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM638163v2 Primary Assembly

    Genomic

    1. NW_024062917.1 Reference ASM638163v2 Primary Assembly

      Range
      982793..991299 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039160126.1 → XP_039016057.1  oxysterol-binding protein-related protein 1C-like

      Conserved Domains (2) summary
      cd13294
      Location:107 → 241
      PH_ORP_plant; Plant Oxysterol binding protein related protein Pleckstrin homology (PH) domain
      pfam01237
      Location:438 → 790
      Oxysterol_BP; Oxysterol-binding protein
    Nucleotide Protein
    Heading Accession and Version

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