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    Fib Fibrillarin [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37662, updated on 9-Dec-2024

    Summary

    Official Symbol
    Fibprovided by FlyBase
    Official Full Name
    Fibrillarinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0003062
    Locus tag
    Dmel_CG9888
    See related
    AllianceGenome:FB:FBgn0003062
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG9888; dFib; Dmel\CG9888; fib; Fibri; fibrillarin; GCR-6; GCR6; pen59C5; Pen59C5
    Summary
    Predicted to enable RNA binding activity; histone H2AQ104 methyltransferase activity; and rRNA methyltransferase activity. Predicted to be involved in box C/D sno(s)RNA 3'-end processing and rRNA methylation. Located in Cajal body and nucleolus. Is expressed in several structures, including adult brain; adult head; adult heart; embryonic/larval midgut primordium; and larval muscle cell. Orthologous to several human genes including FBL (fibrillarin). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Fib in Genome Data Viewer
    Location:
    59C3-59C3; 2-102 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (23072909..23074725, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (18960432..18962248, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene transfer RNA:Serine-TGA 1-1 Neighboring gene transfer RNA:Serine-TGA 2-1 Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene Arginine methyltransferase 7 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables histone H2AQ104 methyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables rRNA methyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in box C/D sno(s)RNA 3'-end processing IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in rRNA methylation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in rRNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in Cajal body IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in Cajal body IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of box C/D methylation guide snoRNP complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in dense fibrillar component ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in nucleolus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleolus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of small-subunit processome IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    fibrillarin
    Names
    CG9888-PA
    Fib-PA
    NP_523817.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      23072909..23074725 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079093.4NP_523817.1  fibrillarin [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_523817.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q24348, Q8IGK5, Q9W1V3
      UniProtKB/TrEMBL
      E4NKN3
      Related
      FBpp0071892
      Conserved Domains (1) summary
      PTZ00146
      Location:109344
      PTZ00146; fibrillarin; Provisional