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    R102.2 DUF4440 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 177959, updated on 9-Dec-2024

    Summary

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    Official Symbol
    R102.2
    Official Full Name
    DUF4440 domain-containing protein
    Primary source
    WormBase:WBGene00011289
    Locus tag
    CELE_R102.2
    See related
    AllianceGenome:WB:WBGene00011289
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in neurons. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See R102.2 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    2
    Sequence:
    Chromosome: IV; NC_003282.8 (10687607..10688135)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene GLPGLI family protein Neighboring gene DUF4440 domain-containing protein Neighboring gene ncRNA Neighboring gene F-box domain-containing protein Neighboring gene TransThyretin-Related family domain Neighboring gene Aromatic amino acid beta-eliminating lyase/threonine aldolase domain-containing protein;Beta_elim_lyase domain-containing protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
    2. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
    3. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    DUF4440 domain-containing protein
    NP_501975.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      10687607..10688135
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_069574.7 → NP_501975.1  DUF4440 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_501975.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q21888
      Conserved Domains (1) summary
      pfam14534
      Location:7 → 112
      DUF4440; Domain of unknown function (DUF4440)
    Nucleotide Protein
    Heading Accession and Version

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