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    Y57A10B.6 SEC-C motif-containing protein [ Caenorhabditis elegans ]

    Gene ID: 174878, updated on 18-Sep-2024

    Summary

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    Official Symbol
    Y57A10B.6
    Official Full Name
    SEC-C motif-containing protein
    Primary source
    WormBase:WBGene00013278
    Locus tag
    CELE_Y57A10B.6
    See related
    AllianceGenome:WB:WBGene00013278
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See Y57A10B.6 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    4
    Sequence:
    Chromosome: II; NC_003280.10 (12390083..12392662)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene BTB/POZ domain-containing protein Y57A10B.3 Neighboring gene Serpentine Receptor, class E (Epsilon) Neighboring gene ncRNA Neighboring gene Serpentine Receptor, class E (Epsilon) Neighboring gene Gag protease polyprotein Neighboring gene Serpentine Receptor, class E (Epsilon)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    2. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SEC-C motif-containing protein
    NP_496629.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      12390083..12392662
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_064228.4 → NP_496629.1  SEC-C motif-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_496629.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XWH5
      Conserved Domains (1) summary
      pfam07149
      Location:1 → 368
      Pes-10; Pes-10
    Nucleotide Protein
    Heading Accession and Version

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