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Links from Protein

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    tba-5 Tubulin alpha chain [ Caenorhabditis elegans ]

    Gene ID: 184569, updated on 9-Dec-2024

    Summary

    Official Symbol
    tba-5
    Official Full Name
    Tubulin alpha chain
    Primary source
    WormBase:WBGene00006531
    Locus tag
    CELE_F16D3.1
    See related
    AllianceGenome:WB:WBGene00006531
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable GTP binding activity. Predicted to be a structural constituent of cytoskeleton. Predicted to be involved in microtubule cytoskeleton organization and mitotic cell cycle. Located in axonemal microtubule. Is expressed in amphid neurons and phasmid neurons. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See tba-5 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    6
    Sequence:
    Chromosome: I; NC_003279.8 (8353382..8358273)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene histone acetyltransferase Neighboring gene SAC domain-containing protein Neighboring gene putative cytochrome P450 CYP36A1 Neighboring gene Tudor domain-containing protein Neighboring gene Tubulin-specific chaperone D Neighboring gene G_PROTEIN_RECEP_F1_2 domain-containing protein Neighboring gene PQ-loop repeat-containing protein 1

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables GTP binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables structural constituent of cytoskeleton IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables structural constituent of cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in microtubule cytoskeleton organization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in microtubule-based process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in mitotic cell cycle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in axonemal microtubule IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in microtubule IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in microtubule IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Tubulin alpha chain
    NP_492268.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      8353382..8358273
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_059867.3NP_492268.1  Tubulin alpha chain [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_492268.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q19490
      Conserved Domains (2) summary
      PTZ00335
      Location:1446
      PTZ00335; tubulin alpha chain; Provisional
      cd02186
      Location:2435
      alpha_tubulin; The alpha-tubulin family