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    HOOK3 hook microtubule tethering protein 3 [ Gopherus evgoodei (Goodes thornscrub tortoise) ]

    Gene ID: 115653261, updated on 17-Mar-2024

    Summary

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    Gene symbol
    HOOK3
    Gene description
    hook microtubule tethering protein 3
    See related
    Ensembl:ENSGEVG00005001593
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gopherus evgoodei
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Testudinidae; Gopherus
    Orthologs
    human mouse all
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    Genomic context

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    See HOOK3 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    100 current rGopEvg1_v1.p (GCF_007399415.2) 6 NC_044327.1 (6386654..6572756, complement)

    Chromosome 6 - NC_044327.1Genomic Context describing neighboring genes Neighboring gene fucosyltransferase 10 Neighboring gene farnesyltransferase, CAAX box, subunit alpha Neighboring gene potassium channel modulatory factor 1 Neighboring gene ring finger protein 170 Neighboring gene transcription factor jun-D-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_044327.1 Chromosome 6 Reference rGopEvg1_v1.p Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables dynein light intermediate chain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic microtubule organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cytoskeleton-dependent intracellular transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein Hook homolog 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gopherus evgoodei Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rGopEvg1_v1.p Primary Assembly

    Genomic

    1. NC_044327.1 Reference rGopEvg1_v1.p Primary Assembly

      Range
      6386654..6572756 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030566232.1 → XP_030422092.1  protein Hook homolog 3 isoform X5

      UniProtKB/TrEMBL
      A0A8C4VGL6
      Conserved Domains (1) summary
      pfam05622
      Location:12 → 710
      HOOK; HOOK protein

    2. XM_030566229.1 → XP_030422089.1  protein Hook homolog 3 isoform X2

      UniProtKB/TrEMBL
      A0A8C4VGL6
      Conserved Domains (1) summary
      pfam05622
      Location:12 → 712
      HOOK; HOOK protein

    3. XM_030566231.1 → XP_030422091.1  protein Hook homolog 3 isoform X4

      UniProtKB/TrEMBL
      A0A8C4VGL6
      Related
      ENSGEVP00005002145.1, ENSGEVT00005002255.1
      Conserved Domains (1) summary
      pfam05622
      Location:12 → 711
      HOOK; HOOK protein

    4. XM_030566234.1 → XP_030422094.1  protein Hook homolog 3 isoform X6

      UniProtKB/TrEMBL
      A0A8C4VGL6
      Conserved Domains (1) summary
      pfam05622
      Location:12 → 706
      HOOK; HOOK protein

    5. XM_030566228.1 → XP_030422088.1  protein Hook homolog 3 isoform X1

      UniProtKB/TrEMBL
      A0A8C4VGL6
      Conserved Domains (1) summary
      pfam05622
      Location:12 → 713
      HOOK; HOOK protein

    6. XM_030566237.1 → XP_030422097.1  protein Hook homolog 3 isoform X9

      UniProtKB/TrEMBL
      A0A8C4XWP2
      Conserved Domains (1) summary
      pfam05622
      Location:1 → 673
      HOOK; HOOK protein

    7. XM_030566238.1 → XP_030422098.1  protein Hook homolog 3 isoform X10

      UniProtKB/TrEMBL
      A0A8C4XWP2
      Related
      ENSGEVP00005002114.1, ENSGEVT00005002222.1
      Conserved Domains (1) summary
      pfam05622
      Location:6 → 670
      HOOK; HOOK protein

    8. XM_030566239.1 → XP_030422099.1  protein Hook homolog 3 isoform X11

      UniProtKB/TrEMBL
      A0A8C4XWP2
      Conserved Domains (1) summary
      pfam05622
      Location:1 → 556
      HOOK; HOOK protein

    9. XM_030566235.1 → XP_030422095.1  protein Hook homolog 3 isoform X7

      UniProtKB/TrEMBL
      A0A8C4VGL6
      Conserved Domains (1) summary
      pfam05622
      Location:12 → 713
      HOOK; HOOK protein

    10. XM_030566230.1 → XP_030422090.1  protein Hook homolog 3 isoform X3

      UniProtKB/TrEMBL
      A0A8C4VGL6
      Conserved Domains (1) summary
      pfam05622
      Location:12 → 713
      HOOK; HOOK protein

    11. XM_030566236.1 → XP_030422096.1  protein Hook homolog 3 isoform X8

      UniProtKB/TrEMBL
      A0A8C4VGL6
      Conserved Domains (1) summary
      pfam05622
      Location:12 → 710
      HOOK; HOOK protein
    Nucleotide Protein
    Heading Accession and Version

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