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    COBL cordon-bleu WH2 repeat protein [ Strigops habroptila (Kakapo) ]

    Gene ID: 115613112, updated on 3-Aug-2024

    Summary

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    Gene symbol
    COBL
    Gene description
    cordon-bleu WH2 repeat protein
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Strigops habroptila
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
    Orthologs
    human mouse all
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    Genomic context

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    See COBL in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    101 current bStrHab1.2.pri (GCF_004027225.2) 1 NC_044277.2 (70452024..70610500)
    100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 1 NC_044277.1 (70506737..70665213)

    Chromosome 1 - NC_044277.2Genomic Context describing neighboring genes Neighboring gene V-set and transmembrane domain containing 2A Neighboring gene uncharacterized LOC115617662 Neighboring gene growth factor receptor bound protein 10 Neighboring gene dopa decarboxylase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin monomer binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament network formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in actin filament polymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in axonal growth cone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in dendritic growth cone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuronal cell body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in perinuclear region of cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ruffle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in terminal web IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein cordon-bleu

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bStrHab1.2.pri

    Genomic

    1. NC_044277.2 Reference bStrHab1.2.pri

      Range
      70452024..70610500
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030498289.1 → XP_030354149.1  protein cordon-bleu isoform X9

      Conserved Domains (1) summary
      pfam09469
      Location:154 → 231
      Cobl; Cordon-bleu ubiquitin-like domain

    2. XM_030498248.1 → XP_030354108.1  protein cordon-bleu isoform X5

      Conserved Domains (1) summary
      pfam09469
      Location:154 → 230
      Cobl; Cordon-bleu ubiquitin-like domain

    3. XM_030498204.1 → XP_030354064.1  protein cordon-bleu isoform X1

      Conserved Domains (1) summary
      pfam09469
      Location:154 → 230
      Cobl; Cordon-bleu ubiquitin-like domain

    4. XM_030498213.1 → XP_030354073.1  protein cordon-bleu isoform X2

      Conserved Domains (1) summary
      pfam09469
      Location:154 → 230
      Cobl; Cordon-bleu ubiquitin-like domain

    5. XM_030498266.1 → XP_030354126.1  protein cordon-bleu isoform X7

      Conserved Domains (1) summary
      pfam09469
      Location:154 → 230
      Cobl; Cordon-bleu ubiquitin-like domain

    6. XM_030498238.1 → XP_030354098.1  protein cordon-bleu isoform X5

      Conserved Domains (1) summary
      pfam09469
      Location:154 → 230
      Cobl; Cordon-bleu ubiquitin-like domain

    7. XM_030498222.1 → XP_030354082.1  protein cordon-bleu isoform X3

      Conserved Domains (1) summary
      pfam09469
      Location:154 → 231
      Cobl; Cordon-bleu ubiquitin-like domain

    8. XM_030498256.1 → XP_030354116.1  protein cordon-bleu isoform X6

      Conserved Domains (1) summary
      pfam09469
      Location:154 → 231
      Cobl; Cordon-bleu ubiquitin-like domain

    9. XM_030498276.1 → XP_030354136.1  protein cordon-bleu isoform X8

      Conserved Domains (1) summary
      pfam09469
      Location:154 → 231
      Cobl; Cordon-bleu ubiquitin-like domain

    10. XM_030498283.1 → XP_030354143.1  protein cordon-bleu isoform X9

      Conserved Domains (1) summary
      pfam09469
      Location:154 → 231
      Cobl; Cordon-bleu ubiquitin-like domain

    11. XM_030498231.1 → XP_030354091.1  protein cordon-bleu isoform X4

      Conserved Domains (1) summary
      pfam09469
      Location:137 → 213
      Cobl; Cordon-bleu ubiquitin-like domain
    Nucleotide Protein
    Heading Accession and Version

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