U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    ARCN1 archain 1 [ Lynx canadensis (Canada lynx) ]

    Gene ID: 115524496, updated on 13-Aug-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    ARCN1
    Gene description
    archain 1
    See related
    Ensembl:ENSLCNG00005018358
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lynx canadensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Lynx
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ARCN1 in Genome Data Viewer
    Location:
    chromosome: D1
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    102 current mLynCan4.pri.v2 (GCF_007474595.2) D1 NC_044312.2 (16104738..16131760)
    101 previous assembly mLynCan4_v1.p (GCF_007474595.1) D1 NC_044312.1 (16104738..16131760)

    Chromosome D1 - NC_044312.2Genomic Context describing neighboring genes Neighboring gene intraflagellar transport 46 Neighboring gene 60S ribosomal protein L7a-like Neighboring gene U6 spliceosomal RNA Neighboring gene pleckstrin homology like domain family B member 1 Neighboring gene trehalase

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in Golgi localization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of COPI vesicle coat IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    coatomer subunit delta

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Lynx canadensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mLynCan4.pri.v2

    Genomic

    1. NC_044312.2 Reference mLynCan4.pri.v2

      Range
      16104738..16131760
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030330823.2 → XP_030186683.1  coatomer subunit delta isoform X1

      UniProtKB/TrEMBL
      A0A667HNA0, A0A667ITD4
      Related
      ENSLCNP00005028213.1, ENSLCNT00005031518.1
      Conserved Domains (2) summary
      cd09254
      Location:272 → 508
      AP_delta-COPI_MHD; Mu homology domain (MHD) of adaptor protein (AP) coat protein I (COPI) delta subunit
      cd14830
      Location:4 → 133
      Delta_COP_N; delta subunit of the F-COPI complex, N-terminal domain

    2. XM_030330824.1 → XP_030186684.1  coatomer subunit delta isoform X2

      Conserved Domains (3) summary
      cd09254
      Location:272 → 418
      AP_delta-COPI_MHD; Mu homology domain (MHD) of adaptor protein (AP) coat protein I (COPI) delta subunit
      cd14830
      Location:4 → 133
      Delta_COP_N; delta subunit of the F-COPI complex, N-terminal domain
      pfam16174
      Location:156 → 234
      IHABP4_N; Intracellular hyaluronan-binding protein 4 N-terminal
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.