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    Trp1 Translocation protein 1 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34333, updated on 9-Dec-2024

    Summary

    Official Symbol
    Trp1provided by FlyBase
    Official Full Name
    Translocation protein 1provided by FlyBase
    Primary source
    FLYBASE:FBgn0011584
    Locus tag
    Dmel_CG4758
    See related
    AllianceGenome:FB:FBgn0011584
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG4758; Dmel\CG4758; Dtrp1; sec62; Tp1
    Summary
    Enables endoplasmic reticulum-autophagosome adaptor activity and protein transmembrane transporter activity. Involved in post-translational protein targeting to membrane, translocation and reticulophagy. Located in endomembrane system. Part of Sec62/Sec63 complex. Is active in endoplasmic reticulum membrane. Is expressed in several structures, including adult head; adult heart; ejaculatory duct; gonad; and male accessory gland. Orthologous to human SEC62 (SEC62 homolog, preprotein translocation factor). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Trp1 in Genome Data Viewer
    Location:
    30F5-30F5; 2-38 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (10009381..10013170)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (10009381..10013170)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Sister of Yb Neighboring gene antisense RNA:CR44873 Neighboring gene Nucleosome-destabilizing factor Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables endoplasmic reticulum-autophagosome adaptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein transmembrane transporter activity IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    enables protein transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in post-translational protein targeting to membrane, translocation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in post-translational protein targeting to membrane, translocation IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in post-translational protein targeting to membrane, translocation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in reticulophagy IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of Sec62/Sec63 complex IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    located_in endomembrane system HDA PubMed 
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in endoplasmic reticulum membrane IC
    Inferred by Curator
    more info
    PubMed 
    is_active_in endoplasmic reticulum membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    translocation protein 1
    Names
    CG4758-PA
    CG4758-PB
    CG4758-PC
    CG4758-PD
    Trp1-PA
    Trp1-PB
    Trp1-PC
    Trp1-PD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      10009381..10013170
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_057660.4NP_477008.1  translocation protein 1, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_477008.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q24559, Q9VL50
      Related
      FBpp0079521
      Conserved Domains (1) summary
      pfam03839
      Location:92290
      Sec62; Translocation protein Sec62
    2. NM_001298863.1NP_001285792.1  translocation protein 1, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285792.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q24559, X2J9A4
      Conserved Domains (1) summary
      pfam03839
      Location:92290
      Sec62; Translocation protein Sec62
    3. NM_164885.3NP_723510.1  translocation protein 1, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_723510.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q24559, Q9VL49
      Related
      FBpp0079522
      Conserved Domains (1) summary
      pfam03839
      Location:105303
      Sec62; Translocation protein Sec62
    4. NM_001259031.2NP_001245960.1  translocation protein 1, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001245960.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      C6SV41, Q24559
      Conserved Domains (1) summary
      pfam03839
      Location:105303
      Sec62; Translocation protein Sec62