U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    eif2d eukaryotic translation initiation factor 2D [ Takifugu rubripes (torafugu) ]

    Gene ID: 101067905, updated on 8-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    eif2d
    Gene description
    eukaryotic translation initiation factor 2D
    See related
    Ensembl:ENSTRUG00000012383
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Takifugu rubripes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
    Orthologs
    human zebrafish all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See eif2d in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current fTakRub1.2 (GCF_901000725.2) 3 NC_042287.1 (12737043..12742921, complement)
    101 previous assembly FUGU5 (GCF_000180615.1) 3 NC_018892.1 (9614827..9620679, complement)

    Chromosome 3 - NC_042287.1Genomic Context describing neighboring genes Neighboring gene RhAG-2 protein Neighboring gene probable G-protein coupled receptor 139 Neighboring gene fibromodulin b Neighboring gene colony stimulating factor 1b (macrophage)

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in formation of translation preinitiation complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in translational initiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    eukaryotic translation initiation factor 2D

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fTakRub1.2 Primary Assembly

    Genomic

    1. NC_042287.1 Reference fTakRub1.2 Primary Assembly

      Range
      12737043..12742921 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011602542.2 → XP_011600844.2  eukaryotic translation initiation factor 2D

      UniProtKB/TrEMBL
      A0A674NMI6
      Related
      ENSTRUP00000074298.1, ENSTRUT00000085150.1
      Conserved Domains (3) summary
      cd11608
      Location:485 → 568
      eIF2D_C; C-terminal domain of eIF2D and related proteins
      COG2016
      Location:7 → 179
      Tma20; Predicted ribosome-associated RNA-binding protein Tma20, contains PUA domain [Translation, ribosomal structure and biogenesis]
      pfam17832
      Location:2 → 90
      Pre-PUA; Pre-PUA-like domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.