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    LOC115196487 trafficking kinesin-binding protein 2-like [ Salmo trutta (river trout) ]

    Gene ID: 115196487, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC115196487
    Gene description
    trafficking kinesin-binding protein 2-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Salmo trutta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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    Genomic context

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    See LOC115196487 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    100 current fSalTru1.1 (GCF_901001165.1) 6 NC_042962.1 (60006679..60061053, complement)

    Chromosome 6 - NC_042962.1Genomic Context describing neighboring genes Neighboring gene semaphorin-5B-like Neighboring gene transfer RNA serine (anticodon UGA) Neighboring gene uncharacterized LOC115196488 Neighboring gene E3 ubiquitin-protein ligase TRIM39-like Neighboring gene E3 ubiquitin-protein ligase TRIM39-like Neighboring gene cyclic nucleotide-binding domain-containing protein 2-like Neighboring gene STE20 related adaptor beta

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_042962.1 Chromosome 6 Reference fSalTru1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GABA receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in anterograde axonal transport of mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neurogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in dendrite IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    trafficking kinesin-binding protein 2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fSalTru1.1 Primary Assembly

    Genomic

    1. NC_042962.1 Reference fSalTru1.1 Primary Assembly

      Range
      60006679..60061053 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029757364.1 → XP_029613224.1  trafficking kinesin-binding protein 2-like isoform X3

      UniProtKB/TrEMBL
      A0A674CRU6

    2. XM_029757363.1 → XP_029613223.1  trafficking kinesin-binding protein 2-like isoform X2

      UniProtKB/TrEMBL
      A0A674CRU6
      Conserved Domains (2) summary
      pfam04849
      Location:42 → 353
      HAP1_N; HAP1 N-terminal conserved region
      pfam12448
      Location:460 → 557
      Milton; Kinesin associated protein

    3. XM_029757361.1 → XP_029613221.1  trafficking kinesin-binding protein 2-like isoform X1

      UniProtKB/TrEMBL
      A0A674CRU6

    4. XM_029757362.1 → XP_029613222.1  trafficking kinesin-binding protein 2-like isoform X1

      UniProtKB/TrEMBL
      A0A674CRU6

    5. XM_029757365.1 → XP_029613225.1  trafficking kinesin-binding protein 2-like isoform X4

      UniProtKB/TrEMBL
      A0A674CRU6

    6. XM_029757366.1 → XP_029613226.1  trafficking kinesin-binding protein 2-like isoform X5

      UniProtKB/TrEMBL
      A0A674CRU6
      Conserved Domains (2) summary
      pfam04849
      Location:1 → 249
      HAP1_N; HAP1 N-terminal conserved region
      pfam12448
      Location:345 → 454
      Milton; Kinesin associated protein
    Nucleotide Protein
    Heading Accession and Version

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