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    wasf1 WASP family member 1 [ Cottoperca gobio ]

    Gene ID: 115003615, updated on 17-Mar-2024

    Summary

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    Gene symbol
    wasf1
    Gene description
    WASP family member 1
    See related
    Ensembl:ENSCGOG00000015884
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cottoperca gobio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Bovichtidae; Cottoperca
    Orthologs
    human zebrafish all
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    Genomic context

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    See wasf1 in Genome Data Viewer
    Location:
    chromosome: 24
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    100 current fCotGob3.1 (GCF_900634415.1) 24 NC_041378.1 (8602239..8659809)

    Chromosome 24 - NC_041378.1Genomic Context describing neighboring genes Neighboring gene methyltransferase like 24 Neighboring gene cell division cycle 40 homolog (S. cerevisiae) Neighboring gene kinesin family member 25 Neighboring gene coiled-coil domain containing 167 Neighboring gene G protein-coupled receptor 6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_041378.1 Chromosome 24 Reference fCotGob3.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables Arp2/3 complex binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase A regulatory subunit binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of Arp2/3 complex-mediated actin nucleation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: wiskott-Aldrich syndrome protein family member 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cottoperca gobio Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fCotGob3.1

    Genomic

    1. NC_041378.1 Reference fCotGob3.1

      Range
      8602239..8659809
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029425482.1 → XP_029281342.1  LOW QUALITY PROTEIN: wiskott-Aldrich syndrome protein family member 1

      UniProtKB/TrEMBL
      A0A6J2P7U4
      Related
      ENSCGOP00000034229.1, ENSCGOT00000036763.1
      Conserved Domains (1) summary
      smart00246
      Location:487 → 504
      WH2; Wiskott Aldrich syndrome homology region 2
    Nucleotide Protein
    Heading Accession and Version

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