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    psmb7 proteasome 20S subunit beta 7 [ Scleropages formosus (Asian bonytongue) ]

    Gene ID: 114910766, updated on 12-Sep-2024

    Summary

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    Gene symbol
    psmb7
    Gene description
    proteasome 20S subunit beta 7
    See related
    Ensembl:ENSSFOG00015014825
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Scleropages formosus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
    Orthologs
    zebrafish all
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    Genomic context

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    See psmb7 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    101 current fSclFor1.1 (GCF_900964775.1) 6 NC_041811.1 (7171513..7181766)

    Chromosome 6 - NC_041811.1Genomic Context describing neighboring genes Neighboring gene nuclear receptor subfamily 6 group A member 1-A-like Neighboring gene nuclear receptor subfamily 5 group A member 2-like Neighboring gene serine/threonine-protein kinase Nek6-like Neighboring gene LIM/homeobox protein Lhx2-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_041811.1 Chromosome 6 Reference fSclFor1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables threonine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis involved in protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of proteasome core complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    proteasome subunit beta type-7-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fSclFor1.1 Primary Assembly

    Genomic

    1. NC_041811.1 Reference fSclFor1.1 Primary Assembly

      Range
      7171513..7181766
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029253204.1 → XP_029109037.1  proteasome subunit beta type-7-like isoform X1

      UniProtKB/TrEMBL
      A0A8C9TR34, A0A8C9VA78
      Related
      ENSSFOP00015023041.1, ENSSFOT00015023294.2
      Conserved Domains (2) summary
      cd03763
      Location:44 → 232
      proteasome_beta_type_7; proteasome beta type-7 subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that ...
      pfam12465
      Location:237 → 280
      Pr_beta_C; Proteasome beta subunits C terminal

    2. XM_029253205.1 → XP_029109038.1  proteasome subunit beta type-7-like isoform X2

      UniProtKB/TrEMBL
      A0A8C9VA78
      Related
      ENSSFOP00015023048.2, ENSSFOT00015023302.2
      Conserved Domains (2) summary
      cd03763
      Location:44 → 232
      proteasome_beta_type_7; proteasome beta type-7 subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that ...
      pfam12465
      Location:237 → 271
      Pr_beta_C; Proteasome beta subunits C terminal
    Nucleotide Protein
    Heading Accession and Version

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