U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    PAX2 paired box 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 710687, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    PAX2provided by VGNC
    Official Full Name
    paired box 2provided by VGNC
    Primary source
    VGNC:VGNC:75761
    See related
    Ensembl:ENSMMUG00000009163
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PAX2 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (101205856..101299796)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (96372924..96477441)

    Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L7a pseudogene Neighboring gene uncharacterized LOC114670023 Neighboring gene uncharacterized LOC114670024 Neighboring gene SMC5-SMC6 complex localization factor 2 Neighboring gene semaphorin 4G Neighboring gene mitochondrial ribosomal protein L43

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in anatomical structure development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    paired box protein Pax-2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041762.1 Reference Mmul_10 Primary Assembly

      Range
      101205856..101299796
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028826770.1 → XP_028682603.1  paired box protein Pax-2 isoform X5

      Conserved Domains (3) summary
      smart00351
      Location:47 → 171
      PAX; Paired Box domain
      pfam12403
      Location:336 → 387
      Pax2_C; Paired-box protein 2 C terminal
      cl00084
      Location:286 → 309
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

    2. XM_015147957.2 → XP_015003443.2  paired box protein Pax-2 isoform X2

      UniProtKB/TrEMBL
      G7N0X9
      Conserved Domains (3) summary
      smart00351
      Location:47 → 171
      PAX; Paired Box domain
      pfam12403
      Location:336 → 394
      Pax2_C; Paired-box protein 2 C terminal
      cl00084
      Location:286 → 309
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

    3. XM_015147956.2 → XP_015003442.2  paired box protein Pax-2 isoform X2

      UniProtKB/TrEMBL
      G7N0X9
      Conserved Domains (3) summary
      smart00351
      Location:47 → 171
      PAX; Paired Box domain
      pfam12403
      Location:336 → 394
      Pax2_C; Paired-box protein 2 C terminal
      cl00084
      Location:286 → 309
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

    4. XM_015147960.2 → XP_015003446.2  paired box protein Pax-2 isoform X6

      UniProtKB/TrEMBL
      G7N0X9
      Conserved Domains (3) summary
      smart00351
      Location:47 → 171
      PAX; Paired Box domain
      pfam12403
      Location:313 → 371
      Pax2_C; Paired-box protein 2 C terminal
      cl00084
      Location:263 → 286
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

    5. XM_015147958.2 → XP_015003444.2  paired box protein Pax-2 isoform X3

      UniProtKB/TrEMBL
      G7N0X9
      Related
      ENSMMUP00000012017.4, ENSMMUT00000012816.4
      Conserved Domains (3) summary
      smart00351
      Location:47 → 171
      PAX; Paired Box domain
      pfam12403
      Location:336 → 446
      Pax2_C; Paired-box protein 2 C terminal
      cl00084
      Location:286 → 309
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

    6. XM_015147955.2 → XP_015003441.2  paired box protein Pax-2 isoform X1

      Conserved Domains (3) summary
      smart00351
      Location:47 → 171
      PAX; Paired Box domain
      pfam12403
      Location:336 → 421
      Pax2_C; Paired-box protein 2 C terminal
      cl00084
      Location:286 → 309
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

    7. XM_015147961.2 → XP_015003447.2  paired box protein Pax-2 isoform X7

      UniProtKB/TrEMBL
      G7N0X9
      Related
      ENSMMUP00000015205.4, ENSMMUT00000016223.4
      Conserved Domains (3) summary
      smart00351
      Location:47 → 171
      PAX; Paired Box domain
      pfam12403
      Location:313 → 423
      Pax2_C; Paired-box protein 2 C terminal
      cl00084
      Location:263 → 286
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

    8. XM_015147959.2 → XP_015003445.2  paired box protein Pax-2 isoform X4

      Conserved Domains (3) summary
      smart00351
      Location:47 → 171
      PAX; Paired Box domain
      pfam12403
      Location:313 → 398
      Pax2_C; Paired-box protein 2 C terminal
      cl00084
      Location:263 → 286
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.