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    DCAF13 DDB1 and CUL4 associated factor 13 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694489, updated on 5-Mar-2024

    Summary

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    Gene symbol
    DCAF13
    Gene description
    DDB1 and CUL4 associated factor 13
    See related
    Ensembl:ENSMMUG00000019405
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See DCAF13 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (103692316..103719464)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (102151050..102178031)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene collagen triple helix repeat containing 1 Neighboring gene uncharacterized LOC114680317 Neighboring gene solute carrier family 25 member 32 Neighboring gene mediator of RNA polymerase II transcription subunit 21 pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene regulating synaptic membrane exocytosis 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of small-subunit processome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DDB1- and CUL4-associated factor 13

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      103692316..103719464
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028852851.1 → XP_028708684.1  DDB1- and CUL4-associated factor 13

      UniProtKB/TrEMBL
      H9F6A3
      Related
      ENSMMUP00000025499.4, ENSMMUT00000027256.4
      Conserved Domains (3) summary
      cd00200
      Location:137 → 431
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:148 → 185
      7WD40; WD40 repeat [structural motif]
      pfam04158
      Location:433 → 516
      Sof1; Sof1-like domain
    Nucleotide Protein
    Heading Accession and Version

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