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    ZIK1 zinc finger protein interacting with K protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708621, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ZIK1provided by VGNC
    Official Full Name
    zinc finger protein interacting with K protein 1provided by VGNC
    Primary source
    VGNC:VGNC:81611
    See related
    Ensembl:ENSMMUG00000009292
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human all
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    Genomic context

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    See ZIK1 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (57179646..57195520)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (51732056..51746685, complement)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 550 Neighboring gene vomeronasal 1 receptor macMulV1R-ps1048 pseudogene Neighboring gene zinc finger protein 416 Neighboring gene zinc finger protein 530 Neighboring gene zinc finger protein 134

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables histone H3K36 methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables histone H3K4 methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables recombination hotspot binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of reciprocal meiotic recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein interacting with ribonucleoprotein K
    Names
    zinc finger protein interacting with K protein 1 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      57179646..57195520
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015125070.2 → XP_014980556.2  zinc finger protein interacting with ribonucleoprotein K isoform X2

      Conserved Domains (3) summary
      COG5048
      Location:262 → 437
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:369 → 389
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:241 → 266
      zf-H2C2_2; Zinc-finger double domain

    2. XM_001094516.4 → XP_001094516.2  zinc finger protein interacting with ribonucleoprotein K isoform X1

      UniProtKB/TrEMBL
      F7H3L6
      Related
      ENSMMUP00000012173.3, ENSMMUT00000012987.4
      Conserved Domains (4) summary
      COG5048
      Location:274 → 449
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:381 → 401
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:26 → 67
      KRAB; KRAB box
      pfam13465
      Location:253 → 278
      zf-H2C2_2; Zinc-finger double domain

    3. XM_002801422.3 → XP_002801468.2  zinc finger protein interacting with ribonucleoprotein K isoform X3

      Conserved Domains (4) summary
      COG5048
      Location:261 → 436
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:368 → 388
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:13 → 54
      KRAB; KRAB box
      pfam13465
      Location:240 → 265
      zf-H2C2_2; Zinc-finger double domain

    4. XM_028840078.1 → XP_028695911.1  zinc finger protein interacting with ribonucleoprotein K isoform X5

      Conserved Domains (2) summary
      COG5048
      Location:171 → 346
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:278 → 298
      ZF_C2H2; C2H2 Zn finger [structural motif]

    5. XM_028840077.1 → XP_028695910.1  zinc finger protein interacting with ribonucleoprotein K isoform X4

      Conserved Domains (3) summary
      COG5048
      Location:219 → 394
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:326 → 346
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:198 → 223
      zf-H2C2_2; Zinc-finger double domain

    6. XM_015125071.2 → XP_014980557.2  zinc finger protein interacting with ribonucleoprotein K isoform X4

      Conserved Domains (3) summary
      COG5048
      Location:219 → 394
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:326 → 346
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:198 → 223
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
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