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    YJU2B YJU2 splicing factor homolog B [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718398, updated on 17-Aug-2024

    Summary

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    Official Symbol
    YJU2Bprovided by VGNC
    Official Full Name
    YJU2 splicing factor homolog Bprovided by VGNC
    Primary source
    VGNC:VGNC:70887
    See related
    Ensembl:ENSMMUG00000018068
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    CCDC130
    Orthologs
    human mouse all
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    Genomic context

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    See YJU2B in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (13332820..13361740)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (13734280..13763868)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L12 pseudogene Neighboring gene calcium voltage-gated channel subunit alpha1 A Neighboring gene uncharacterized LOC114674111 Neighboring gene chromosome 19 C19orf53 homolog Neighboring gene methylthioribose-1-phosphate isomerase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of U2-type spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of post-mRNA release spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    coiled-coil domain-containing protein 130
    Names
    coiled-coil domain containing 130

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      13332820..13361740
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015123088.2 → XP_014978574.2  coiled-coil domain-containing protein 130 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QST5, G7NLY0, H9G085, I0FVD3
      Conserved Domains (1) summary
      pfam04502
      Location:8 → 221
      DUF572; Family of unknown function (DUF572)

    2. XM_015123089.2 → XP_014978575.2  coiled-coil domain-containing protein 130 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QST5, G7NLY0, H9G085, I0FVD3
      Conserved Domains (1) summary
      pfam04502
      Location:8 → 221
      DUF572; Family of unknown function (DUF572)

    3. XM_015123090.2 → XP_014978576.2  coiled-coil domain-containing protein 130 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QST5, G7NLY0, H9G085, I0FVD3
      Conserved Domains (1) summary
      pfam04502
      Location:8 → 221
      DUF572; Family of unknown function (DUF572)

    4. XM_015123091.2 → XP_014978577.2  coiled-coil domain-containing protein 130 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QST5, G7NLY0, H9G085, I0FVD3
      Conserved Domains (1) summary
      pfam04502
      Location:8 → 221
      DUF572; Family of unknown function (DUF572)

    5. XM_015123087.2 → XP_014978573.2  coiled-coil domain-containing protein 130 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QST5, G7NLY0, H9G085, I0FVD3
      Related
      ENSMMUP00000051113.2, ENSMMUT00000070962.2
      Conserved Domains (1) summary
      pfam04502
      Location:8 → 221
      DUF572; Family of unknown function (DUF572)

    6. XM_028839613.1 → XP_028695446.1  coiled-coil domain-containing protein 130 isoform X2

      UniProtKB/TrEMBL
      F6UIL1
      Conserved Domains (1) summary
      pfam04502
      Location:1 → 172
      DUF572; Family of unknown function (DUF572)

    7. XM_015123092.2 → XP_014978578.2  coiled-coil domain-containing protein 130 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QST5, G7NLY0, H9G085, I0FVD3
      Related
      ENSMMUP00000065863.1, ENSMMUT00000098829.1
      Conserved Domains (1) summary
      pfam04502
      Location:8 → 221
      DUF572; Family of unknown function (DUF572)
    Nucleotide Protein
    Heading Accession and Version

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