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    KCNN1 potassium calcium-activated channel subfamily N member 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 720091, updated on 17-Aug-2024

    Summary

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    Official Symbol
    KCNN1provided by VGNC
    Official Full Name
    potassium calcium-activated channel subfamily N member 1provided by VGNC
    Primary source
    VGNC:VGNC:74002
    See related
    Ensembl:ENSMMUG00000007398
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See KCNN1 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (17473833..17522800)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (17954397..18002505)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene ATP synthase subunit f, mitochondrial pseudogene Neighboring gene coiled-coil domain containing 124 Neighboring gene arrestin domain containing 2 Neighboring gene NAD(P)H-hydrate epimerase pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables small conductance calcium-activated potassium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in potassium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuronal cell body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    small conductance calcium-activated potassium channel protein 1
    Names
    potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      17473833..17522800
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028838958.1 → XP_028694791.1  small conductance calcium-activated potassium channel protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A5F7ZLU8, F6T3L2, H9FU71
      Related
      ENSMMUP00000009708.4, ENSMMUT00000010346.4
      Conserved Domains (3) summary
      smart01053
      Location:387 → 465
      CaMBD; Calmodulin binding domain
      pfam03530
      Location:96 → 203
      SK_channel; Calcium-activated SK potassium channel
      pfam07885
      Location:291 → 373
      Ion_trans_2; Ion channel

    2. XM_028838959.1 → XP_028694792.1  small conductance calcium-activated potassium channel protein 1 isoform X6

      UniProtKB/TrEMBL
      A0A5F7ZLU8, H9FU72
      Related
      ENSMMUP00000066602.1, ENSMMUT00000089253.1
      Conserved Domains (3) summary
      smart01053
      Location:384 → 462
      CaMBD; Calmodulin binding domain
      pfam03530
      Location:96 → 203
      SK_channel; Calcium-activated SK potassium channel
      pfam07885
      Location:291 → 366
      Ion_trans_2; Ion channel

    3. XM_015123286.2 → XP_014978772.1  small conductance calcium-activated potassium channel protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A5F7ZLU8, F6T3L2, H9FU71
      Conserved Domains (3) summary
      smart01053
      Location:387 → 465
      CaMBD; Calmodulin binding domain
      pfam03530
      Location:96 → 203
      SK_channel; Calcium-activated SK potassium channel
      pfam07885
      Location:291 → 373
      Ion_trans_2; Ion channel

    4. XM_015123285.2 → XP_014978771.2  small conductance calcium-activated potassium channel protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QD29
      Conserved Domains (4) summary
      smart01053
      Location:470 → 548
      CaMBD; Calmodulin binding domain
      pfam15694
      Location:25 → 142
      Med26_M; Mediator complex subunit 26 middle domain
      pfam03530
      Location:179 → 286
      SK_channel; Calcium-activated SK potassium channel
      pfam07885
      Location:374 → 452
      Ion_trans_2; Ion channel

    5. XM_028838956.1 → XP_028694789.1  small conductance calcium-activated potassium channel protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A1D5QD29
      Conserved Domains (4) summary
      smart01053
      Location:470 → 545
      CaMBD; Calmodulin binding domain
      pfam15694
      Location:25 → 142
      Med26_M; Mediator complex subunit 26 middle domain
      pfam03530
      Location:179 → 286
      SK_channel; Calcium-activated SK potassium channel
      pfam07885
      Location:374 → 452
      Ion_trans_2; Ion channel

    6. XM_015123287.2 → XP_014978773.2  small conductance calcium-activated potassium channel protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QD29
      Conserved Domains (4) summary
      smart01053
      Location:467 → 545
      CaMBD; Calmodulin binding domain
      pfam15694
      Location:25 → 142
      Med26_M; Mediator complex subunit 26 middle domain
      pfam03530
      Location:179 → 286
      SK_channel; Calcium-activated SK potassium channel
      pfam07885
      Location:374 → 449
      Ion_trans_2; Ion channel

    7. XM_028838957.1 → XP_028694790.1  small conductance calcium-activated potassium channel protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A1D5QD29, A0A5F8AQH7
      Related
      ENSMMUP00000080200.1, ENSMMUT00000100902.1
      Conserved Domains (4) summary
      smart01053
      Location:467 → 542
      CaMBD; Calmodulin binding domain
      pfam15694
      Location:25 → 142
      Med26_M; Mediator complex subunit 26 middle domain
      pfam03530
      Location:179 → 286
      SK_channel; Calcium-activated SK potassium channel
      pfam07885
      Location:374 → 449
      Ion_trans_2; Ion channel

    RNA

    1. XR_003724898.1 RNA Sequence

    2. XR_003724897.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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