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    BPTF bromodomain PHD finger transcription factor [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718812, updated on 17-Aug-2024

    Summary

    Official Symbol
    BPTFprovided by VGNC
    Official Full Name
    bromodomain PHD finger transcription factorprovided by VGNC
    Primary source
    VGNC:VGNC:70464
    See related
    Ensembl:ENSMMUG00000009734
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    NEW
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    Genomic context

    See BPTF in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    32
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (64221639..64376193)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (61337995..61492510)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA38 Neighboring gene nucleolar protein 11 Neighboring gene 60S ribosomal protein L17 pseudogene Neighboring gene chromosome 16 C17orf58 homolog Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables methylated histone binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of NURF complex IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    nucleosome-remodeling factor subunit BPTF

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      64221639..64376193
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028836701.1XP_028692534.1  nucleosome-remodeling factor subunit BPTF isoform X3

      UniProtKB/TrEMBL
      G7NJB7
      Conserved Domains (8) summary
      cd05509
      Location:30413141
      Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
      cd15559
      Location:391433
      PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      cd15560
      Location:29793025
      PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      pfam09606
      Location:22652545
      Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
      pfam15613
      Location:455523
      WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
      pfam02791
      Location:240296
      DDT; DDT domain
      pfam15612
      Location:343380
      WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
      pfam17380
      Location:26652839
      DUF5401; Family of unknown function (DUF5401)
    2. XM_028836699.1XP_028692532.1  nucleosome-remodeling factor subunit BPTF isoform X1

      UniProtKB/TrEMBL
      F6ZW60, G7NJB7
      Related
      ENSMMUP00000012745.4, ENSMMUT00000013603.4
      Conserved Domains (8) summary
      cd05509
      Location:30413141
      Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
      cd15559
      Location:391433
      PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      cd15560
      Location:29793025
      PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      pfam09606
      Location:22652545
      Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
      pfam15613
      Location:455523
      WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
      pfam02791
      Location:240296
      DDT; DDT domain
      pfam15612
      Location:343380
      WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
      pfam17380
      Location:26652839
      DUF5401; Family of unknown function (DUF5401)
    3. XM_028836703.1XP_028692536.1  nucleosome-remodeling factor subunit BPTF isoform X5

      UniProtKB/TrEMBL
      F7BQT5, G7NJB7
      Related
      ENSMMUP00000034157.3, ENSMMUT00000041121.3
      Conserved Domains (8) summary
      cd05509
      Location:29833083
      Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
      cd15559
      Location:391433
      PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      cd15560
      Location:29212967
      PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      pfam09606
      Location:22652557
      Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
      pfam15613
      Location:455523
      WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
      pfam02791
      Location:240296
      DDT; DDT domain
      pfam15612
      Location:343380
      WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
      pfam17380
      Location:26652839
      DUF5401; Family of unknown function (DUF5401)
    4. XM_028836711.1XP_028692544.1  nucleosome-remodeling factor subunit BPTF isoform X14

      UniProtKB/TrEMBL
      G7NJB7
      Conserved Domains (7) summary
      cd05509
      Location:28402940
      Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
      cd15559
      Location:391433
      PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      cd15560
      Location:27782824
      PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      pfam09606
      Location:21832539
      Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
      pfam15613
      Location:455523
      WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
      pfam02791
      Location:240296
      DDT; DDT domain
      pfam15612
      Location:343380
      WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
    5. XM_028836702.1XP_028692535.1  nucleosome-remodeling factor subunit BPTF isoform X4

      UniProtKB/TrEMBL
      F6ZW43, G7NJB7
      Related
      ENSMMUP00000012747.4, ENSMMUT00000013605.4
      Conserved Domains (8) summary
      cd05509
      Location:29873087
      Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
      cd15559
      Location:391433
      PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      cd15560
      Location:29252971
      PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      pfam03157
      Location:21032498
      Glutenin_hmw; High molecular weight glutenin subunit
      pfam15613
      Location:455523
      WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
      pfam02791
      Location:240296
      DDT; DDT domain
      pfam15612
      Location:343380
      WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
      pfam17380
      Location:26112785
      DUF5401; Family of unknown function (DUF5401)
    6. XM_015120174.2XP_014975660.2  nucleosome-remodeling factor subunit BPTF isoform X8

      UniProtKB/TrEMBL
      G7NJB7
      Conserved Domains (8) summary
      cd05509
      Location:29293029
      Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
      cd15559
      Location:391433
      PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      cd15560
      Location:28672913
      PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      pfam03157
      Location:21032498
      Glutenin_hmw; High molecular weight glutenin subunit
      pfam15613
      Location:455523
      WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
      pfam02791
      Location:240296
      DDT; DDT domain
      pfam15612
      Location:343380
      WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
      pfam17380
      Location:26112785
      DUF5401; Family of unknown function (DUF5401)
    7. XM_028836700.1XP_028692533.1  nucleosome-remodeling factor subunit BPTF isoform X2

      UniProtKB/TrEMBL
      G7NJB7
      Conserved Domains (8) summary
      cd05509
      Location:30403140
      Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
      cd15559
      Location:391433
      PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      cd15560
      Location:29783024
      PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      pfam09606
      Location:22642556
      Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
      pfam15613
      Location:455523
      WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
      pfam02791
      Location:240296
      DDT; DDT domain
      pfam15612
      Location:343380
      WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
      pfam17380
      Location:26642838
      DUF5401; Family of unknown function (DUF5401)
    8. XM_028836704.1XP_028692537.1  nucleosome-remodeling factor subunit BPTF isoform X6

      UniProtKB/TrEMBL
      F6ZW73, G7NJB7
      Related
      ENSMMUP00000012743.4, ENSMMUT00000013601.4
      Conserved Domains (8) summary
      cd05509
      Location:29783078
      Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
      cd15559
      Location:391433
      PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      cd15560
      Location:29162962
      PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      pfam09606
      Location:22022494
      Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
      pfam15613
      Location:455523
      WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
      pfam02791
      Location:240296
      DDT; DDT domain
      pfam15612
      Location:343380
      WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
      pfam17380
      Location:26022776
      DUF5401; Family of unknown function (DUF5401)
    9. XM_028836705.1XP_028692538.1  nucleosome-remodeling factor subunit BPTF isoform X7

      UniProtKB/TrEMBL
      A0A5F8AT01, G7NJB7
      Related
      ENSMMUP00000080208.1, ENSMMUT00000095666.1
      Conserved Domains (8) summary
      cd05509
      Location:29783078
      Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
      cd15559
      Location:391433
      PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      cd15560
      Location:29162962
      PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      pfam09606
      Location:22022494
      Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
      pfam15613
      Location:455523
      WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
      pfam02791
      Location:240296
      DDT; DDT domain
      pfam15612
      Location:343380
      WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
      pfam17380
      Location:26022776
      DUF5401; Family of unknown function (DUF5401)
    10. XM_028836706.1XP_028692539.1  nucleosome-remodeling factor subunit BPTF isoform X9

      UniProtKB/TrEMBL
      G7NJB7
      Conserved Domains (8) summary
      cd05509
      Location:29153015
      Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
      cd15559
      Location:391433
      PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      cd15560
      Location:28532899
      PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      pfam09606
      Location:21392431
      Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
      pfam15613
      Location:455523
      WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
      pfam02791
      Location:240296
      DDT; DDT domain
      pfam15612
      Location:343380
      WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
      pfam17380
      Location:25392713
      DUF5401; Family of unknown function (DUF5401)
    11. XM_028836713.1XP_028692546.1  nucleosome-remodeling factor subunit BPTF isoform X16

      UniProtKB/TrEMBL
      G7NJB7
      Conserved Domains (8) summary
      cd05509
      Location:28032903
      Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
      cd15559
      Location:391433
      PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      cd15560
      Location:27412787
      PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      pfam03157
      Location:19772372
      Glutenin_hmw; High molecular weight glutenin subunit
      pfam15613
      Location:455523
      WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
      pfam02791
      Location:240296
      DDT; DDT domain
      pfam15612
      Location:343380
      WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
      pfam17380
      Location:24852659
      DUF5401; Family of unknown function (DUF5401)
    12. XM_028836708.1XP_028692541.1  nucleosome-remodeling factor subunit BPTF isoform X11

      UniProtKB/TrEMBL
      G7NJB7
      Conserved Domains (8) summary
      cd05509
      Location:28982998
      Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
      COG5034
      Location:25972827
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15559
      Location:391433
      PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      cd15560
      Location:28362882
      PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      pfam09606
      Location:21832539
      Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
      pfam15613
      Location:455523
      WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
      pfam02791
      Location:240296
      DDT; DDT domain
      pfam15612
      Location:343380
      WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
    13. XM_028836710.1XP_028692543.1  nucleosome-remodeling factor subunit BPTF isoform X13

      UniProtKB/TrEMBL
      G7NJB7
      Conserved Domains (7) summary
      cd05509
      Location:28442944
      Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
      cd15559
      Location:391433
      PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      cd15560
      Location:27822828
      PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      pfam03157
      Location:21032488
      Glutenin_hmw; High molecular weight glutenin subunit
      pfam15613
      Location:455523
      WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
      pfam02791
      Location:240296
      DDT; DDT domain
      pfam15612
      Location:343380
      WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
    14. XM_028836712.1XP_028692545.1  nucleosome-remodeling factor subunit BPTF isoform X15

      UniProtKB/TrEMBL
      G7NJB7
      Conserved Domains (7) summary
      cd05509
      Location:27862886
      Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
      cd15559
      Location:391433
      PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      cd15560
      Location:27242770
      PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      pfam03157
      Location:21032488
      Glutenin_hmw; High molecular weight glutenin subunit
      pfam15613
      Location:455523
      WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
      pfam02791
      Location:240296
      DDT; DDT domain
      pfam15612
      Location:343380
      WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
    15. XM_028836709.1XP_028692542.1  nucleosome-remodeling factor subunit BPTF isoform X12

      UniProtKB/TrEMBL
      G7NJB7
      Conserved Domains (8) summary
      cd05509
      Location:28612961
      Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
      cd15559
      Location:391433
      PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      cd15560
      Location:27992845
      PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      pfam03157
      Location:19772372
      Glutenin_hmw; High molecular weight glutenin subunit
      pfam15613
      Location:455523
      WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
      pfam02791
      Location:240296
      DDT; DDT domain
      pfam15612
      Location:343380
      WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
      pfam17380
      Location:24852659
      DUF5401; Family of unknown function (DUF5401)
    16. XM_028836707.1XP_028692540.1  nucleosome-remodeling factor subunit BPTF isoform X10

      UniProtKB/TrEMBL
      G7NJB7
      Conserved Domains (8) summary
      cd05509
      Location:29033003
      Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
      cd15559
      Location:253295
      PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      cd15560
      Location:28412887
      PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
      pfam09606
      Location:21272419
      Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
      pfam15613
      Location:317385
      WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
      pfam02791
      Location:102158
      DDT; DDT domain
      pfam15612
      Location:205242
      WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
      pfam17380
      Location:25272701
      DUF5401; Family of unknown function (DUF5401)

    RNA

    1. XR_003723844.1 RNA Sequence

    2. XR_003723843.1 RNA Sequence