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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference Mmul_10 Primary Assembly
Genomic
-
NC_041769.1 Reference Mmul_10 Primary Assembly
- Range
-
64221639..64376193
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_028836701.1 → XP_028692534.1 nucleosome-remodeling factor subunit BPTF isoform X3
- UniProtKB/TrEMBL
-
G7NJB7
- Conserved Domains (8) summary
-
- cd05509
Location:3041 → 3141
- Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
- cd15559
Location:391 → 433
- PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- cd15560
Location:2979 → 3025
- PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- pfam09606
Location:2265 → 2545
- Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
- pfam15613
Location:455 → 523
- WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
- pfam02791
Location:240 → 296
- DDT; DDT domain
- pfam15612
Location:343 → 380
- WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
- pfam17380
Location:2665 → 2839
- DUF5401; Family of unknown function (DUF5401)
-
XM_028836699.1 → XP_028692532.1 nucleosome-remodeling factor subunit BPTF isoform X1
- UniProtKB/TrEMBL
- F6ZW60, G7NJB7
- Related
- ENSMMUP00000012745.4, ENSMMUT00000013603.4
- Conserved Domains (8) summary
-
- cd05509
Location:3041 → 3141
- Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
- cd15559
Location:391 → 433
- PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- cd15560
Location:2979 → 3025
- PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- pfam09606
Location:2265 → 2545
- Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
- pfam15613
Location:455 → 523
- WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
- pfam02791
Location:240 → 296
- DDT; DDT domain
- pfam15612
Location:343 → 380
- WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
- pfam17380
Location:2665 → 2839
- DUF5401; Family of unknown function (DUF5401)
-
XM_028836703.1 → XP_028692536.1 nucleosome-remodeling factor subunit BPTF isoform X5
- UniProtKB/TrEMBL
- F7BQT5, G7NJB7
- Related
- ENSMMUP00000034157.3, ENSMMUT00000041121.3
- Conserved Domains (8) summary
-
- cd05509
Location:2983 → 3083
- Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
- cd15559
Location:391 → 433
- PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- cd15560
Location:2921 → 2967
- PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- pfam09606
Location:2265 → 2557
- Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
- pfam15613
Location:455 → 523
- WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
- pfam02791
Location:240 → 296
- DDT; DDT domain
- pfam15612
Location:343 → 380
- WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
- pfam17380
Location:2665 → 2839
- DUF5401; Family of unknown function (DUF5401)
-
XM_028836711.1 → XP_028692544.1 nucleosome-remodeling factor subunit BPTF isoform X14
- UniProtKB/TrEMBL
-
G7NJB7
- Conserved Domains (7) summary
-
- cd05509
Location:2840 → 2940
- Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
- cd15559
Location:391 → 433
- PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- cd15560
Location:2778 → 2824
- PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- pfam09606
Location:2183 → 2539
- Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
- pfam15613
Location:455 → 523
- WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
- pfam02791
Location:240 → 296
- DDT; DDT domain
- pfam15612
Location:343 → 380
- WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
-
XM_028836702.1 → XP_028692535.1 nucleosome-remodeling factor subunit BPTF isoform X4
- UniProtKB/TrEMBL
- F6ZW43, G7NJB7
- Related
- ENSMMUP00000012747.4, ENSMMUT00000013605.4
- Conserved Domains (8) summary
-
- cd05509
Location:2987 → 3087
- Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
- cd15559
Location:391 → 433
- PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- cd15560
Location:2925 → 2971
- PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- pfam03157
Location:2103 → 2498
- Glutenin_hmw; High molecular weight glutenin subunit
- pfam15613
Location:455 → 523
- WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
- pfam02791
Location:240 → 296
- DDT; DDT domain
- pfam15612
Location:343 → 380
- WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
- pfam17380
Location:2611 → 2785
- DUF5401; Family of unknown function (DUF5401)
-
XM_015120174.2 → XP_014975660.2 nucleosome-remodeling factor subunit BPTF isoform X8
- UniProtKB/TrEMBL
-
G7NJB7
- Conserved Domains (8) summary
-
- cd05509
Location:2929 → 3029
- Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
- cd15559
Location:391 → 433
- PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- cd15560
Location:2867 → 2913
- PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- pfam03157
Location:2103 → 2498
- Glutenin_hmw; High molecular weight glutenin subunit
- pfam15613
Location:455 → 523
- WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
- pfam02791
Location:240 → 296
- DDT; DDT domain
- pfam15612
Location:343 → 380
- WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
- pfam17380
Location:2611 → 2785
- DUF5401; Family of unknown function (DUF5401)
-
XM_028836700.1 → XP_028692533.1 nucleosome-remodeling factor subunit BPTF isoform X2
- UniProtKB/TrEMBL
-
G7NJB7
- Conserved Domains (8) summary
-
- cd05509
Location:3040 → 3140
- Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
- cd15559
Location:391 → 433
- PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- cd15560
Location:2978 → 3024
- PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- pfam09606
Location:2264 → 2556
- Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
- pfam15613
Location:455 → 523
- WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
- pfam02791
Location:240 → 296
- DDT; DDT domain
- pfam15612
Location:343 → 380
- WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
- pfam17380
Location:2664 → 2838
- DUF5401; Family of unknown function (DUF5401)
-
XM_028836704.1 → XP_028692537.1 nucleosome-remodeling factor subunit BPTF isoform X6
- UniProtKB/TrEMBL
- F6ZW73, G7NJB7
- Related
- ENSMMUP00000012743.4, ENSMMUT00000013601.4
- Conserved Domains (8) summary
-
- cd05509
Location:2978 → 3078
- Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
- cd15559
Location:391 → 433
- PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- cd15560
Location:2916 → 2962
- PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- pfam09606
Location:2202 → 2494
- Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
- pfam15613
Location:455 → 523
- WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
- pfam02791
Location:240 → 296
- DDT; DDT domain
- pfam15612
Location:343 → 380
- WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
- pfam17380
Location:2602 → 2776
- DUF5401; Family of unknown function (DUF5401)
-
XM_028836705.1 → XP_028692538.1 nucleosome-remodeling factor subunit BPTF isoform X7
- UniProtKB/TrEMBL
- A0A5F8AT01, G7NJB7
- Related
- ENSMMUP00000080208.1, ENSMMUT00000095666.1
- Conserved Domains (8) summary
-
- cd05509
Location:2978 → 3078
- Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
- cd15559
Location:391 → 433
- PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- cd15560
Location:2916 → 2962
- PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- pfam09606
Location:2202 → 2494
- Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
- pfam15613
Location:455 → 523
- WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
- pfam02791
Location:240 → 296
- DDT; DDT domain
- pfam15612
Location:343 → 380
- WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
- pfam17380
Location:2602 → 2776
- DUF5401; Family of unknown function (DUF5401)
-
XM_028836706.1 → XP_028692539.1 nucleosome-remodeling factor subunit BPTF isoform X9
- UniProtKB/TrEMBL
-
G7NJB7
- Conserved Domains (8) summary
-
- cd05509
Location:2915 → 3015
- Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
- cd15559
Location:391 → 433
- PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- cd15560
Location:2853 → 2899
- PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- pfam09606
Location:2139 → 2431
- Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
- pfam15613
Location:455 → 523
- WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
- pfam02791
Location:240 → 296
- DDT; DDT domain
- pfam15612
Location:343 → 380
- WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
- pfam17380
Location:2539 → 2713
- DUF5401; Family of unknown function (DUF5401)
-
XM_028836713.1 → XP_028692546.1 nucleosome-remodeling factor subunit BPTF isoform X16
- UniProtKB/TrEMBL
-
G7NJB7
- Conserved Domains (8) summary
-
- cd05509
Location:2803 → 2903
- Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
- cd15559
Location:391 → 433
- PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- cd15560
Location:2741 → 2787
- PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- pfam03157
Location:1977 → 2372
- Glutenin_hmw; High molecular weight glutenin subunit
- pfam15613
Location:455 → 523
- WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
- pfam02791
Location:240 → 296
- DDT; DDT domain
- pfam15612
Location:343 → 380
- WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
- pfam17380
Location:2485 → 2659
- DUF5401; Family of unknown function (DUF5401)
-
XM_028836708.1 → XP_028692541.1 nucleosome-remodeling factor subunit BPTF isoform X11
- UniProtKB/TrEMBL
-
G7NJB7
- Conserved Domains (8) summary
-
- cd05509
Location:2898 → 2998
- Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
- COG5034
Location:2597 → 2827
- TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
- cd15559
Location:391 → 433
- PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- cd15560
Location:2836 → 2882
- PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- pfam09606
Location:2183 → 2539
- Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
- pfam15613
Location:455 → 523
- WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
- pfam02791
Location:240 → 296
- DDT; DDT domain
- pfam15612
Location:343 → 380
- WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
-
XM_028836710.1 → XP_028692543.1 nucleosome-remodeling factor subunit BPTF isoform X13
- UniProtKB/TrEMBL
-
G7NJB7
- Conserved Domains (7) summary
-
- cd05509
Location:2844 → 2944
- Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
- cd15559
Location:391 → 433
- PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- cd15560
Location:2782 → 2828
- PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- pfam03157
Location:2103 → 2488
- Glutenin_hmw; High molecular weight glutenin subunit
- pfam15613
Location:455 → 523
- WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
- pfam02791
Location:240 → 296
- DDT; DDT domain
- pfam15612
Location:343 → 380
- WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
-
XM_028836712.1 → XP_028692545.1 nucleosome-remodeling factor subunit BPTF isoform X15
- UniProtKB/TrEMBL
-
G7NJB7
- Conserved Domains (7) summary
-
- cd05509
Location:2786 → 2886
- Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
- cd15559
Location:391 → 433
- PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- cd15560
Location:2724 → 2770
- PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- pfam03157
Location:2103 → 2488
- Glutenin_hmw; High molecular weight glutenin subunit
- pfam15613
Location:455 → 523
- WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
- pfam02791
Location:240 → 296
- DDT; DDT domain
- pfam15612
Location:343 → 380
- WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
-
XM_028836709.1 → XP_028692542.1 nucleosome-remodeling factor subunit BPTF isoform X12
- UniProtKB/TrEMBL
-
G7NJB7
- Conserved Domains (8) summary
-
- cd05509
Location:2861 → 2961
- Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
- cd15559
Location:391 → 433
- PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- cd15560
Location:2799 → 2845
- PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- pfam03157
Location:1977 → 2372
- Glutenin_hmw; High molecular weight glutenin subunit
- pfam15613
Location:455 → 523
- WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
- pfam02791
Location:240 → 296
- DDT; DDT domain
- pfam15612
Location:343 → 380
- WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
- pfam17380
Location:2485 → 2659
- DUF5401; Family of unknown function (DUF5401)
-
XM_028836707.1 → XP_028692540.1 nucleosome-remodeling factor subunit BPTF isoform X10
- UniProtKB/TrEMBL
-
G7NJB7
- Conserved Domains (8) summary
-
- cd05509
Location:2903 → 3003
- Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
- cd15559
Location:253 → 295
- PHD1_BPTF; PHD finger 1 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- cd15560
Location:2841 → 2887
- PHD2_3_BPTF; PHD finger 2 and 3 found in bromodomain and PHD finger-containing transcription factor (BPTF)
- pfam09606
Location:2127 → 2419
- Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
- pfam15613
Location:317 → 385
- WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
- pfam02791
Location:102 → 158
- DDT; DDT domain
- pfam15612
Location:205 → 242
- WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
- pfam17380
Location:2527 → 2701
- DUF5401; Family of unknown function (DUF5401)
RNA
-
XR_003723844.1 RNA Sequence
-
XR_003723843.1 RNA Sequence