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    LOC713683 arachidonate 12-lipoxygenase, epidermal-type-like [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713683, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC713683
    Gene description
    arachidonate 12-lipoxygenase, epidermal-type-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
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    Genomic context

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    See LOC713683 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (6603507..6645878)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (6803535..6848443)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene F-box protein 39 Neighboring gene tektin 1 Neighboring gene uncharacterized LOC114673043 Neighboring gene ribosome maturation protein SBDS pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables arachidonate 12(S)-lipoxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables arachidonate 15-lipoxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in linoleic acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in lipid oxidation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    arachidonate 12-lipoxygenase, epidermal-type-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      6603507..6645878
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015118411.2 → XP_014973897.2  arachidonate 12-lipoxygenase, epidermal-type-like isoform X1

      Conserved Domains (2) summary
      pfam00305
      Location:161 → 653
      Lipoxygenase
      cl00011
      Location:2 → 111
      PLAT; PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and ...

    2. XM_015118413.2 → XP_014973899.2  arachidonate 12-lipoxygenase, epidermal-type-like isoform X2

      Conserved Domains (2) summary
      pfam00305
      Location:100 → 592
      Lipoxygenase
      cl00011
      Location:2 → 50
      PLAT; PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and ...

    3. XM_028835950.1 → XP_028691783.1  arachidonate 12-lipoxygenase, epidermal-type-like isoform X2

      Conserved Domains (2) summary
      pfam00305
      Location:100 → 592
      Lipoxygenase
      cl00011
      Location:2 → 50
      PLAT; PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and ...

    4. XM_028835949.1 → XP_028691782.1  arachidonate 12-lipoxygenase, epidermal-type-like isoform X1

      Conserved Domains (2) summary
      pfam00305
      Location:161 → 653
      Lipoxygenase
      cl00011
      Location:2 → 111
      PLAT; PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and ...
    Nucleotide Protein
    Heading Accession and Version

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