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    RABEP1 rabaptin, RAB GTPase binding effector protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711646, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RABEP1provided by VGNC
    Official Full Name
    rabaptin, RAB GTPase binding effector protein 1provided by VGNC
    Primary source
    VGNC:VGNC:76502
    See related
    Ensembl:ENSMMUG00000010465
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RABEP1 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (5073022..5178009)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (5186394..5292974)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 594 Neighboring gene SLP adaptor and CSK interacting membrane protein Neighboring gene nucleoporin 88 Neighboring gene RPA interacting protein Neighboring gene complement C1q binding protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables growth factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Golgi to plasma membrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endocytic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rab GTPase-binding effector protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      5073022..5178009
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028835942.1 → XP_028691775.1  rab GTPase-binding effector protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5R8Y3, A0A1D5RDY1, H9ESF8
      Related
      ENSMMUP00000058524.2, ENSMMUT00000078066.2
      Conserved Domains (2) summary
      pfam03528
      Location:9 → 495
      Rabaptin
      pfam09311
      Location:533 → 839
      Rab5-bind; Rabaptin-like protein

    2. XM_028835943.1 → XP_028691776.1  rab GTPase-binding effector protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5R8Y3
      Conserved Domains (2) summary
      pfam03528
      Location:11 → 452
      Rabaptin
      pfam09311
      Location:490 → 796
      Rab5-bind; Rabaptin-like protein

    3. XM_028835944.1 → XP_028691777.1  rab GTPase-binding effector protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A1D5R8Y3
      Conserved Domains (2) summary
      pfam03528
      Location:8 → 449
      Rabaptin
      pfam09311
      Location:487 → 793
      Rab5-bind; Rabaptin-like protein
    Nucleotide Protein
    Heading Accession and Version

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