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    STAMBP STAM binding protein [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714562, updated on 17-Aug-2024

    Summary

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    Official Symbol
    STAMBPprovided by VGNC
    Official Full Name
    STAM binding proteinprovided by VGNC
    Primary source
    VGNC:VGNC:77935
    Locus tag
    EGK_05452
    See related
    Ensembl:ENSMMUG00000010864
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See STAMBP in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (34967334..35003787, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (74828014..74864437)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106993011 Neighboring gene deoxyguanosine kinase Neighboring gene actin gamma 2, smooth muscle Neighboring gene palmitoyltransferase ZDHHC6-like Neighboring gene uncharacterized LOC106993010 Neighboring gene chromosome 13 C2orf78 homolog Neighboring gene dual specificity phosphatase 11

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables K63-linked deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables metal-dependent deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein K63-linked deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cleavage furrow IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    STAM-binding protein
    NP_001247533.1
    XP_014968045.1
    XP_014968046.1
    XP_014968047.1
    XP_014968048.1
    XP_028687450.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001260604.1 → NP_001247533.1  STAM-binding protein

      See identical proteins and their annotated locations for NP_001247533.1

      Status: PROVISIONAL

      Source sequence(s)
      JV045955
      UniProtKB/TrEMBL
      A0A5F7ZHI6, A0A5F7ZWI5, A0A8J8Y8Y0, G7NAC8
      Conserved Domains (2) summary
      cd08066
      Location:254 → 424
      MPN_AMSH_like; Mov34/MPN/PAD-1 family
      pfam08969
      Location:13 → 115
      USP8_dimer; USP8 dimerization domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      34967334..35003787 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015112560.2 → XP_014968046.1  STAM-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZHI6, A0A5F7ZWI5, A0A8J8Y8Y0, G7NAC8
      Related
      ENSMMUP00000036464.2, ENSMMUT00000043462.3
      Conserved Domains (2) summary
      cd08066
      Location:254 → 424
      MPN_AMSH_like; Mov34/MPN/PAD-1 family
      pfam08969
      Location:13 → 115
      USP8_dimer; USP8 dimerization domain

    2. XM_028831617.1 → XP_028687450.1  STAM-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZHI6, A0A5F7ZWI5, A0A8J8Y8Y0, G7NAC8
      Conserved Domains (2) summary
      cd08066
      Location:254 → 424
      MPN_AMSH_like; Mov34/MPN/PAD-1 family
      pfam08969
      Location:13 → 115
      USP8_dimer; USP8 dimerization domain

    3. XM_015112561.2 → XP_014968047.1  STAM-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZHI6, A0A5F7ZWI5, A0A8J8Y8Y0, G7NAC8
      Related
      ENSMMUP00000077254.1, ENSMMUT00000108161.1
      Conserved Domains (2) summary
      cd08066
      Location:254 → 424
      MPN_AMSH_like; Mov34/MPN/PAD-1 family
      pfam08969
      Location:13 → 115
      USP8_dimer; USP8 dimerization domain

    4. XM_015112559.2 → XP_014968045.1  STAM-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZHI6, A0A5F7ZWI5, A0A8J8Y8Y0, G7NAC8
      Related
      ENSMMUP00000065051.1, ENSMMUT00000094623.1
      Conserved Domains (2) summary
      cd08066
      Location:254 → 424
      MPN_AMSH_like; Mov34/MPN/PAD-1 family
      pfam08969
      Location:13 → 115
      USP8_dimer; USP8 dimerization domain

    5. XM_015112562.2 → XP_014968048.1  STAM-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZHI6, A0A5F7ZWI5, A0A8J8Y8Y0, G7NAC8
      Conserved Domains (2) summary
      cd08066
      Location:254 → 424
      MPN_AMSH_like; Mov34/MPN/PAD-1 family
      pfam08969
      Location:13 → 115
      USP8_dimer; USP8 dimerization domain
    Nucleotide Protein
    Heading Accession and Version

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