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    ARHGEF16 Rho guanine nucleotide exchange factor 16 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694808, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ARHGEF16provided by VGNC
    Official Full Name
    Rho guanine nucleotide exchange factor 16provided by VGNC
    Primary source
    VGNC:VGNC:69830
    See related
    Ensembl:ENSMMUG00000009354
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ARHGEF16 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (221038337..221065779, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (2407037..2434692)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114677493 Neighboring gene multiple EGF like domains 6 Neighboring gene microRNA mir-551a Neighboring gene uncharacterized LOC106998152 Neighboring gene uncharacterized LOC106998107 Neighboring gene PR/SET domain 16

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in activation of GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rho guanine nucleotide exchange factor 16
    Names
    Rho guanine exchange factor (GEF) 16
    Rho guanine nucleotide exchange factor (GEF) 16

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      221038337..221065779 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001082733.4 → XP_001082733.3  rho guanine nucleotide exchange factor 16

      UniProtKB/TrEMBL
      A0A5S6RAB1, A0A8J8XL09, F7HJG1, G7MGH8
      Conserved Domains (3) summary
      cd11938
      Location:633 → 686
      SH3_ARHGEF16_26; Src homology 3 domain of the Rho guanine nucleotide exchange factors ARHGEF16 and ARHGEF26
      cd01221
      Location:489 → 622
      PH_ephexin; Ephexin Pleckstrin homology (PH) domain
      pfam00621
      Location:288 → 466
      RhoGEF; RhoGEF domain

    2. XM_028840869.1 → XP_028696702.1  rho guanine nucleotide exchange factor 16

      UniProtKB/TrEMBL
      A0A5S6RAB1, A0A8J8XL09, F7HJG1, G7MGH8
      Related
      ENSMMUP00000012248.4, ENSMMUT00000013068.4
      Conserved Domains (3) summary
      cd11938
      Location:633 → 686
      SH3_ARHGEF16_26; Src homology 3 domain of the Rho guanine nucleotide exchange factors ARHGEF16 and ARHGEF26
      cd01221
      Location:489 → 622
      PH_ephexin; Ephexin Pleckstrin homology (PH) domain
      pfam00621
      Location:288 → 466
      RhoGEF; RhoGEF domain
    Nucleotide Protein
    Heading Accession and Version

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