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    SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712393, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SH3GLB1provided by VGNC
    Official Full Name
    SH3 domain containing GRB2 like, endophilin B1provided by VGNC
    Primary source
    VGNC:VGNC:77206
    Locus tag
    EGK_00934
    See related
    Ensembl:ENSMMUG00000013487
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SH3GLB1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (137746218..137791534, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (86873258..86918562)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene heparan sulfate 2-O-sulfotransferase 1 Neighboring gene selenoprotein F Neighboring gene uncharacterized LOC106999549 Neighboring gene uncharacterized LOC106999547 Neighboring gene mitochondrial import inner membrane translocase subunit TIM50 pseudogene Neighboring gene calcium-activated chloride channel regulator 1-like Neighboring gene transcription initiation factor TFIID subunit 9-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in membrane organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    endophilin-B1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266360.1 → NP_001253289.1  endophilin-B1

      See identical proteins and their annotated locations for NP_001253289.1

      Status: PROVISIONAL

      Source sequence(s)
      JV047246
      UniProtKB/TrEMBL
      A0A1D5Q796
      Related
      ENSMMUP00000043912.2, ENSMMUT00000059609.2
      Conserved Domains (2) summary
      cd07616
      Location:24 → 252
      BAR_Endophilin_B1; The Bin/Amphiphysin/Rvs (BAR) domain of Endophilin-B1
      cd11945
      Location:305 → 365
      SH3_Endophilin_B1; Src homology 3 domain of Endophilin-B1

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      137746218..137791534 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015143843.2 → XP_014999329.1  endophilin-B1 isoform X5

      Conserved Domains (2) summary
      cd11945
      Location:283 → 343
      SH3_Endophilin_B1; Src homology 3 domain of Endophilin-B1
      cl12013
      Location:1 → 230
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

    2. XM_015143838.2 → XP_014999324.1  endophilin-B1 isoform X3

      UniProtKB/TrEMBL
      A0A5S6RBM8, A0A8J8XBY1, F6ZLA9, F6ZLB8
      Related
      ENSMMUP00000017726.3, ENSMMUT00000018928.4
      Conserved Domains (2) summary
      cd07616
      Location:24 → 273
      BAR_Endophilin_B1; The Bin/Amphiphysin/Rvs (BAR) domain of Endophilin-B1
      cd11945
      Location:326 → 386
      SH3_Endophilin_B1; Src homology 3 domain of Endophilin-B1

    3. XM_015143835.2 → XP_014999321.1  endophilin-B1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QE68
      Related
      ENSMMUP00000046337.2, ENSMMUT00000065518.2
      Conserved Domains (2) summary
      cd07616
      Location:24 → 281
      BAR_Endophilin_B1; The Bin/Amphiphysin/Rvs (BAR) domain of Endophilin-B1
      cd11945
      Location:334 → 394
      SH3_Endophilin_B1; Src homology 3 domain of Endophilin-B1

    4. XM_015143832.2 → XP_014999318.1  endophilin-B1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QE68
      Conserved Domains (2) summary
      cd07616
      Location:24 → 289
      BAR_Endophilin_B1; The Bin/Amphiphysin/Rvs (BAR) domain of Endophilin-B1
      cd11945
      Location:342 → 402
      SH3_Endophilin_B1; Src homology 3 domain of Endophilin-B1

    5. XM_028844629.1 → XP_028700462.1  endophilin-B1 isoform X4

      UniProtKB/TrEMBL
      F7HTZ6
      Related
      ENSMMUP00000039798.3, ENSMMUT00000046769.3
      Conserved Domains (2) summary
      cd07616
      Location:24 → 260
      BAR_Endophilin_B1; The Bin/Amphiphysin/Rvs (BAR) domain of Endophilin-B1
      cd11945
      Location:313 → 373
      SH3_Endophilin_B1; Src homology 3 domain of Endophilin-B1
    Nucleotide Protein
    Heading Accession and Version

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