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    Gria4 glutamate ionotropic receptor AMPA type subunit 4 [ Grammomys surdaster ]

    Gene ID: 114624372, updated on 15-Mar-2024

    Summary

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    Gene symbol
    Gria4
    Gene description
    glutamate ionotropic receptor AMPA type subunit 4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Grammomys surdaster
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Grammomys
    Orthologs
    human mouse all
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    Genomic context

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    See Gria4 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    100 current NIH_TR_1.0 (GCF_004785775.1) Unplaced Scaffold NW_021604651.1 (1832680..2200767)

    NW_021604651.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114624440 Neighboring gene U7 small nuclear RNA Neighboring gene Myb/SANT DNA binding domain containing 4 with coiled-coils Neighboring gene kelch repeat and BTB domain containing 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_021604651 Unplaced Scaffold Reference NIH_TR_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables AMPA glutamate receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in modulation of chemical synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in monoatomic ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synaptic transmission, glutamatergic IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of AMPA glutamate receptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in dendritic spine IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glutamate receptor 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Grammomys surdaster Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NIH_TR_1.0

    Genomic

    1. NW_021604651.1 Reference NIH_TR_1.0

      Range
      1832680..2200767
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028771312.1 → XP_028627145.1  glutamate receptor 4 isoform X3

      Conserved Domains (1) summary
      cd06388
      Location:28 → 400
      PBP1_iGluR_AMPA_GluR4; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the GluR4 subunit of the AMPA receptor

    2. XM_028771311.1 → XP_028627144.1  glutamate receptor 4 isoform X2

      Conserved Domains (2) summary
      cd13727
      Location:414 → 795
      PBP2_iGluR_AMPA_GluR4; The ligand-binding domain of the AMPA (alpha-amino-3-hydroxyl-5-methyl-4-isoxazolepropionic acid) subtype GluR4 of ionotropic glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
      cd06388
      Location:28 → 400
      PBP1_iGluR_AMPA_GluR4; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the GluR4 subunit of the AMPA receptor

    3. XM_028771310.1 → XP_028627143.1  glutamate receptor 4 isoform X1

      Conserved Domains (2) summary
      cd13727
      Location:414 → 795
      PBP2_iGluR_AMPA_GluR4; The ligand-binding domain of the AMPA (alpha-amino-3-hydroxyl-5-methyl-4-isoxazolepropionic acid) subtype GluR4 of ionotropic glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
      cd06388
      Location:28 → 400
      PBP1_iGluR_AMPA_GluR4; N-terminal leucine-isoleucine-valine binding protein (LIVBP)-like domain of the GluR4 subunit of the AMPA receptor
    Nucleotide Protein
    Heading Accession and Version

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