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    CG17816 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40928, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG17816provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0037525
    Locus tag
    Dmel_CG17816
    See related
    AllianceGenome:FB:FBgn0037525
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG17816
    Summary
    Predicted to enable microtubule binding activity. Predicted to be involved in negative regulation of centriole replication. Is expressed in adult head. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG17816 in Genome Data Viewer
    Location:
    84E3-84E4; 3-48 cM
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (7855582..7886733, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (3681304..3712455, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene sugarlethal Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR46127 Neighboring gene Arginyl-tRNA synthetase, mitochondrial Neighboring gene mitochondrial ribosomal protein S9 Neighboring gene water witch

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcriptional silencing of transposons by Piwi and maelstrom and its impact on chromatin state and gene expression. Sienski G, et al. Cell, 2012 Nov 21. PMID 23159368, Free PMC Article
    2. The genetic basis and adult reproductive consequences of developmental thermal plasticity. Rodrigues LR, et al. J Anim Ecol, 2022 Jun. PMID 35060127, Free PMC Article
    3. DmGTSF1 is necessary for Piwi-piRISC-mediated transcriptional transposon silencing in the Drosophila ovary. Ohtani H, et al. Genes Dev, 2013 Aug 1. PMID 23913921, Free PMC Article
    4. Fine-tuning enhancer models to predict transcriptional targets across multiple genomes. Aerts S, et al. PLoS One, 2007 Nov 7. PMID 17973026, Free PMC Article
    5. Genomic mapping of Suppressor of Hairy-wing binding sites in Drosophila. Adryan B, et al. Genome Biol, 2007. PMID 17705839, Free PMC Article

    See all (27) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    mobile_element

    • Loc: c7876783-7876713 mobile_element_type = transposon:INE-1{}1838

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in negative regulation of centriole replication IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG17816-PD
    CG17816-PE
    CG17816-PF
    CG17816-PG
    CG17816-PH
    CG17816-PI
    CG17816-PJ
    CG17816-PK

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      7855582..7886733 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001104235.2 → NP_001097705.1  uncharacterized protein Dmel_CG17816, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097705.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8JQV2
      Conserved Domains (1) summary
      pfam15501
      Location:22 → 478
      MDM1; Nuclear protein MDM1

    2. NM_001275421.1 → NP_001262350.1  uncharacterized protein Dmel_CG17816, isoform K [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262350.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4KFF3
      Conserved Domains (1) summary
      pfam15501
      Location:22 → 476
      MDM1; Nuclear protein MDM1

    3. NM_206458.3 → NP_996180.2  uncharacterized protein Dmel_CG17816, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_996180.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7KSW2, Q86PA0
      Conserved Domains (1) summary
      pfam15501
      Location:22 → 478
      MDM1; Nuclear protein MDM1

    4. NM_141487.3 → NP_649744.3  uncharacterized protein Dmel_CG17816, isoform J [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649744.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0C4DHE0
      Conserved Domains (1) summary
      pfam15501
      Location:22 → 534
      MDM1; Nuclear protein MDM1

    5. NM_169199.2 → NP_731192.2  uncharacterized protein Dmel_CG17816, isoform I [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_731192.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0C4DHA8
      Conserved Domains (1) summary
      pfam15501
      Location:22 → 558
      MDM1; Nuclear protein MDM1

    6. NM_001104236.3 → NP_001097706.1  uncharacterized protein Dmel_CG17816, isoform G [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097706.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8JQV3
      Conserved Domains (1) summary
      pfam15501
      Location:22 → 588
      MDM1; Nuclear protein MDM1

    7. NM_169198.3 → NP_731191.2  uncharacterized protein Dmel_CG17816, isoform H [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_731191.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7KSW2, Q86PA0
      Conserved Domains (1) summary
      pfam15501
      Location:22 → 478
      MDM1; Nuclear protein MDM1

    8. NM_001170070.3 → NP_001163541.1  uncharacterized protein Dmel_CG17816, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163541.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      E1JJ81, Q1RKY2
      Conserved Domains (1) summary
      pfam15501
      Location:22 → 199
      MDM1; Nuclear protein MDM1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4KFF3 A0A0B4KFF3
    A0A0C4DHA8 A0A0C4DHA8
    A0A0C4DHE0 A0A0C4DHE0
    A8JQV2 A8JQV2
    A8JQV3 A8JQV3
    E1JJ81 E1JJ81
    Q86PA0 Q86PA0
    Q95SM3 Q95SM3

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