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    GL50803_0013832 D-tyrosyl-tRNA deacylase [ Giardia intestinalis ]

    Gene ID: 5699840, updated on 17-May-2024

    Summary

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    Gene symbol
    GL50803_0013832
    Gene description
    D-tyrosyl-tRNA deacylase
    Locus tag
    GL50803_0013832
    See related
    GiardiaDB:GL50803_0013832; VEuPathDB:GL50803_0013832
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Giardia intestinalis (strain: WB C6, culture-collection: ATCC:50803)
    Lineage
    Eukaryota; Metamonada; Diplomonadida; Hexamitidae; Giardiinae; Giardia
    Old locus tag
    GL50803_13832
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    Genomic context

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    See GL50803_0013832 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_051858.1 (157806..158348)

    Chromosome 3 - NC_051858.1Genomic Context describing neighboring genes Neighboring gene High cysteine membrane protein VSP-like Neighboring gene Kinase, NEK Neighboring gene Ankyrin repeat protein 1 Neighboring gene Ankyrin repeat protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_051858.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic minimalism in the early diverging intestinal parasite Giardia lamblia. Morrison HG, et al. Science, 2007 Sep 28. PMID 17901334
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables D-tyrosyl-tRNA(Tyr) deacylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tRNA metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    D-tyrosyl-tRNA deacylase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_051858.1 Reference assembly

      Range
      157806..158348
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001706893.1 → XP_001706945.1  D-tyrosyl-tRNA deacylase [Giardia intestinalis]

      See identical proteins and their annotated locations for XP_001706945.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A8BHY6, V6TC12
      Conserved Domains (1) summary
      PTZ00120
      Location:1 → 159
      PTZ00120; D-tyrosyl-tRNA(Tyr) deacylase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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