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    sfl N-deacetylase and N-sulfotransferase sfl [ Nasonia vitripennis (jewel wasp) ]

    Gene ID: 100120347, updated on 10-Oct-2024

    Summary

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    Gene symbol
    sfl
    Gene description
    N-deacetylase and N-sulfotransferase sfl
    See related
    NASONIABASE:NV14587
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nasonia vitripennis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha; Chalcidoidea; Pteromalidae; Pteromalinae; Nasonia
    Orthologs
    fruit fly honey bee all
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    Genomic context

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    See sfl in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    104 current Nvit_psr_1.1 (GCF_009193385.2) 2 Unlocalized Scaffold NC_045758.1 (29184073..29290939, complement)
    103 previous assembly Nvit_psr_1 (GCF_009193385.1) 2 Unlocalized Scaffold NW_022279611.1 (6102789..6209657)

    Chromosome 2 - NC_045758.1Genomic Context describing neighboring genes Neighboring gene mitochondrial calcium uniporter Neighboring gene javelin Neighboring gene mediator complex subunit 18 Neighboring gene transfer RNA tyrosine (anticodon GUA) Neighboring gene transfer RNA tyrosine (anticodon GUA) Neighboring gene chymotrypsin-2 Neighboring gene transfer RNA aspartic acid (anticodon GUC)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional and evolutionary insights from the genomes of three parasitoid Nasonia species. Werren JH, et al. Science, 2010 Jan 15. PMID 20075255, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables deacetylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    bifunctional heparan sulfate N-deacetylase/N-sulfotransferase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nasonia vitripennis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Nvit_psr_1.1

    Genomic

    1. NC_045758.1 Reference Nvit_psr_1.1

      Range
      29184073..29290939 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031924711.2 → XP_031780571.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase

      UniProtKB/TrEMBL
      A0A7M7GDZ2
      Conserved Domains (2) summary
      pfam00685
      Location:606 → 854
      Sulfotransfer_1; Sulfotransferase domain
      pfam12062
      Location:36 → 517
      HSNSD; heparan sulfate-N-deacetylase

    2. XM_001603946.5 → XP_001603996.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase

      See identical proteins and their annotated locations for XP_001603996.1

      UniProtKB/TrEMBL
      A0A7M7GDZ2
      Conserved Domains (2) summary
      pfam00685
      Location:606 → 854
      Sulfotransfer_1; Sulfotransferase domain
      pfam12062
      Location:36 → 517
      HSNSD; heparan sulfate-N-deacetylase
    Nucleotide Protein Strain
    Heading Accession and Version

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