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    LOC109332601 basic 7S globulin-like [ Lupinus angustifolius (narrow-leaved blue lupine) ]

    Gene ID: 109332601, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC109332601
    Gene description
    basic 7S globulin-like
    Locus tag
    TanjilG_22621
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Lupinus angustifolius
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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    Genomic context

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    See LOC109332601 in Genome Data Viewer
    Location:
    chromosome: LG02
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    100 current LupAngTanjil_v1.0 (GCF_001865875.1) LG02 NC_032010.1 (2538800..2540416, complement)

    Chromosome LG02 - NC_032010.1Genomic Context describing neighboring genes Neighboring gene nuclear transcription factor Y subunit C-3-like Neighboring gene nuclear transcription factor Y subunit C-3-like Neighboring gene uncharacterized LOC109328664 Neighboring gene uncharacterized LOC109325770

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_032010.1 Chromosome LG02 Reference LupAngTanjil_v1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification and characterisation of seed storage protein transcripts from Lupinus angustifolius. Foley RC, et al. BMC Plant Biol, 2011 Apr 4. PMID 21457583, Free PMC Article
    2. Transcriptome sequencing of different narrow-leafed lupin tissue types provides a comprehensive uni-gene assembly and extensive gene-based molecular markers. Kamphuis LG, et al. Plant Biotechnol J, 2015 Jan. PMID 25060816, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables aspartic-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    basic 7S globulin-like; gamma conglutin 2
    Names
    Gamma conglutin 2
    conglutin gamma 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001426087.1 → NP_001413016.1  gamma conglutin 2 precursor

      Status: VALIDATED

      Source sequence(s)
      GBRP01005485, HQ670417
      UniProtKB/Swiss-Prot
      F5B8W7
      UniProtKB/TrEMBL
      A0A4P1RSN4

    RefSeqs of Annotated Genomes: Lupinus angustifolius Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference LupAngTanjil_v1.0

    Genomic

    1. NC_032010.1 Reference LupAngTanjil_v1.0

      Range
      2538800..2540416 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019567588.1 → XP_019423133.1  basic 7S globulin-like

    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F5B8W7.2 GenPept UniProtKB/Swiss-Prot:F5B8W7

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