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    C8Q69DRAFT_505193 putative Rho GTPase activator [ Paecilomyces variotii ]

    Gene ID: 39601956, updated on 31-Oct-2024

    Summary

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    Gene symbol
    C8Q69DRAFT_505193
    Gene description
    putative Rho GTPase activator
    Locus tag
    C8Q69DRAFT_505193
    See related
    FungiDB:C8Q69DRAFT_505193; VEuPathDB:C8Q69DRAFT_505193
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Paecilomyces variotii (strain: CBS 101075, culture-collection: CBS:101075, type-material: culture from holotype of Talaromyces spectabilis)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Thermoascaceae; Paecilomyces
    Orthologs
    Aspergillus fumigatus all
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    Genomic context

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    See C8Q69DRAFT_505193 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    5

    NW_021167141.1Genomic Context describing neighboring genes Neighboring gene C-3 sterol dehydrogenase/C-4 decarboxylase Neighboring gene ubiquitin conjugating enzyme Neighboring gene Borealin N terminal-domain-containing protein Neighboring gene hypothetical protein Neighboring gene sybindin-like family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_021167141.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic and Genetic Insights Into a Cosmopolitan Fungus, Paecilomyces variotii (Eurotiales). Urquhart AS, et al. Front Microbiol, 2018. PMID 30619145, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in actin cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative Rho GTPase activator
    XP_028488212.1
    • rho-type GTPase-activating protein 1; adaptor protein; rho-type GTPase-activating protein 1. adaptor protein; rho-type GTPase-activating protein 1. adaptor protein. rho-type GTPase-activating protein 1. adaptor protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_021167141.1 Reference assembly

      Range
      3872811..3876741
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028632679.1 → XP_028488212.1  putative Rho GTPase activator [Paecilomyces variotii]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A443I3F7, V5GDJ6
      Conserved Domains (4) summary
      cd09391
      Location:142 → 198
      LIM1_Lrg1p_like; The first LIM domain of Lrg1p, a LIM and RhoGap domain containing protein
      cd09392
      Location:206 → 258
      LIM2_Lrg1p_like; The second LIM domain of Lrg1p, a LIM and RhoGap domain containing protein
      cd04397
      Location:881 → 1091
      RhoGAP_fLRG1; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of fungal LRG1-like proteins. Yeast Lrg1p is required for efficient cell fusion, and mother-daughter cell separation, possibly through acting as a RhoGAP specifically regulating 1, ...
      cl02475
      Location:515 → 572
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
    Nucleotide Protein
    Heading Accession and Version