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    PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 [ Corapipo altera (White-ruffed manakin) ]

    Gene ID: 113950044, updated on 3-Aug-2024

    Summary

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    Gene symbol
    PRKAA2
    Gene description
    protein kinase AMP-activated catalytic subunit alpha 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Corapipo altera
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Corapipo
    Orthologs
    human mouse all
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    Genomic context

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    See PRKAA2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    100 current ASM394572v1 (GCF_003945725.1) Unplaced Scaffold NW_020884899.1 (10064199..10087973)

    NW_020884899.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113949842 Neighboring gene phospholipid phosphatase 3 Neighboring gene FYN binding protein 2 Neighboring gene complement C8 alpha chain

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020884899 Unplaced Scaffold Reference ASM394572v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables AMP-activated protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    5'-AMP-activated protein kinase catalytic subunit alpha-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Corapipo altera Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM394572v1

    Genomic

    1. NW_020884899.1 Reference ASM394572v1

      Range
      10064199..10087973
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027649341.1 → XP_027505142.1  5'-AMP-activated protein kinase catalytic subunit alpha-2

      Conserved Domains (3) summary
      cd12200
      Location:395 → 550
      AMPKA2_C; C-terminal regulatory domain of 5'-AMP-activated serine/threonine kinase, subunit alpha
      cd14404
      Location:285 → 349
      UBA_AID_AAPK2; UBA-like autoinhibitory domain (AID) found in vertebrate 5'-AMP-activated protein kinase catalytic subunit alpha-2 (AMPKalpha-2)
      cd14079
      Location:13 → 268
      STKc_AMPK_alpha; Catalytic domain of the Alpha subunit of the Serine/Threonine Kinase, AMP-activated protein kinase

    2. XM_027649342.1 → XP_027505143.1  5'-AMP-activated protein kinase catalytic subunit alpha-2

      Conserved Domains (3) summary
      cd12200
      Location:395 → 550
      AMPKA2_C; C-terminal regulatory domain of 5'-AMP-activated serine/threonine kinase, subunit alpha
      cd14404
      Location:285 → 349
      UBA_AID_AAPK2; UBA-like autoinhibitory domain (AID) found in vertebrate 5'-AMP-activated protein kinase catalytic subunit alpha-2 (AMPKalpha-2)
      cd14079
      Location:13 → 268
      STKc_AMPK_alpha; Catalytic domain of the Alpha subunit of the Serine/Threonine Kinase, AMP-activated protein kinase

    RNA

    1. XR_003528640.1 RNA Sequence

    2. XR_003528641.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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