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    PLCE1 phospholipase C epsilon 1 [ Corapipo altera (White-ruffed manakin) ]

    Gene ID: 113949336, updated on 3-Aug-2024

    Summary

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    Gene symbol
    PLCE1
    Gene description
    phospholipase C epsilon 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Corapipo altera
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Corapipo
    Orthologs
    human mouse all
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    Genomic context

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    See PLCE1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    36
    Annotation release Status Assembly Chr Location
    100 current ASM394572v1 (GCF_003945725.1) Unplaced Scaffold NW_020884896.1 (2527572..2677710, complement)

    NW_020884896.1Genomic Context describing neighboring genes Neighboring gene D(1)-like dopamine receptor Neighboring gene TBC1 domain family member 12 Neighboring gene uncharacterized LOC113949340 Neighboring gene uncharacterized LOC113949339 Neighboring gene NOC3 like DNA replication regulator Neighboring gene solute carrier family 35 member G1 Neighboring gene protein FRA10AC1 Neighboring gene leucine rich glioma inactivated 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020884896 Unplaced Scaffold Reference ASM394572v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol phospholipase C activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in phosphatidylinositol-mediated signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in small GTPase-mediated signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Corapipo altera Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM394572v1

    Genomic

    1. NW_020884896.1 Reference ASM394572v1

      Range
      2527572..2677710 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027647743.1 → XP_027503544.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 isoform X4

    2. XM_027647742.1 → XP_027503543.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 isoform X3

    3. XM_027647741.1 → XP_027503542.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 isoform X2

    4. XM_027647739.1 → XP_027503540.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 isoform X1

    5. XM_027647740.1 → XP_027503541.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 isoform X1

    Nucleotide Protein
    Heading Accession and Version

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