U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    HCAG_03435 hypothetical protein [ Histoplasma mississippiense (nom. inval.) ]

    Gene ID: 5448308, updated on 31-Oct-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    HCAG_03435
    Gene description
    hypothetical protein
    Locus tag
    HCAG_03435
    See related
    FungiDB:HCAG_03435; VEuPathDB:HCAG_03435
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Histoplasma mississippiense (nom. inval.) (strain: NAm1)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Ajellomycetaceae; Histoplasma; unclassified Histoplasma
    Orthologs
    Aspergillus fumigatus all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See HCAG_03435 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_001813980.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene pre-mRNA splicing factor prp46

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_001813980.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of nuclear pore IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in NLS-bearing protein import into nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nuclear pore organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to nuclear inner membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of nuclear pore IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of nuclear pore central transport channel IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001813980.1 Reference assembly

      Range
      1002491..1004041 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001541288.1 → XP_001541338.1  predicted protein [Histoplasma mississippiense (nom. inval.)]

      See identical proteins and their annotated locations for XP_001541338.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A6R1C8
      Conserved Domains (4) summary
      pfam10577
      Location:163 → 239
      UPF0560; uncharacterized protein family UPF0560
      pfam13634
      Location:6 → 127
      Nucleoporin_FG; Nucleoporin FG repeat region
      pfam13874
      Location:219 → 350
      Nup54; Nucleoporin complex subunit 54
      cl21478
      Location:340 → 414
      ATP-synt_B; ATP synthase B/B' CF(0)
    Protein Accession Links
    GenPept Link UniProtKB Link
    EDN06905.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials