U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    CRK39 cysteine-rich RLK (RECEPTOR-like protein kinase) 39 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825785, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CRK39
    Official Full Name
    cysteine-rich RLK (RECEPTOR-like protein kinase) 39
    Primary source
    TAIR:AT4G04540
    Locus tag
    AT4G04540
    See related
    Araport:AT4G04540
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    cysteine-rich RLK (RECEPTOR-like protein kinase) 39; F4H6.4
    Summary
    Encodes a cysteine-rich receptor-like protein kinase.
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CRK39 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    6
    Sequence:
    Chromosome: 4; NC_003075.7 (2259498..2262320)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene Myb family transcription factor Neighboring gene pseudo

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Abiotic stress-inducible receptor-like kinases negatively control ABA signaling in Arabidopsis. Tanaka H, et al. Plant J, 2012 May. PMID 22225700
    2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    cysteine-rich RLK (RECEPTOR-like protein kinase) 39
    NP_192363.1
    • cysteine-rich RLK (RECEPTOR-like protein kinase) 39 (CRK39); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 40 (TAIR:AT4G04570.1); Has 125664 Blast hits to 124100 proteins in 4695 species: Archae - 110; Bacteria - 14484; Metazoa - 46060; Fungi - 11047; Plants - 34830; Viruses - 446; Other Eukaryotes - 18687 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      2259498..2262320
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001340487.1 → NP_001328289.1  cysteine-rich RLK (RECEPTOR-like protein kinase) 39 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V5P0, A0A1P8B489

    2. NM_116692.2 → NP_192363.1  cysteine-rich RLK (RECEPTOR-like protein kinase) 39 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192363.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SYS7
      UniProtKB/TrEMBL
      A0A178V5P0
      Conserved Domains (3) summary
      smart00220
      Location:353 → 611
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cd14066
      Location:359 → 616
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      pfam01657
      Location:29 → 115
      Stress-antifung; Salt stress response/antifungal

    3. NM_001340488.1 → NP_001328290.1  cysteine-rich RLK (RECEPTOR-like protein kinase) 39 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B476

    4. NM_001340489.1 → NP_001328288.1  cysteine-rich RLK (RECEPTOR-like protein kinase) 39 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V5P0, A0A1P8B4A2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SYS7.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.