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    NS2 asparaginyl-tRNA synthetase 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819930, updated on 18-Sep-2024

    Summary

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    Official Symbol
    NS2
    Official Full Name
    asparaginyl-tRNA synthetase 2
    Primary source
    TAIR:AT3G07420
    Locus tag
    AT3G07420
    See related
    Araport:AT3G07420
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    asparaginyl-tRNA synthetase 2; ASPARAGINYL-TRNA SYNTHETASE 2; ATNS2; SYNC2; SYNC2_ARATH; SYNTHETASE C2
    Summary
    Encodes an asparaginyl-tRNA synthetase.
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    Genomic context

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    See NS2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Sequence:
    Chromosome: 3; NC_003074.8 (2373913..2376975, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene auxin-induced in root cultures-like protein Neighboring gene lipase class 3 family protein Neighboring gene RAB GTPase homolog A5B Neighboring gene uncharacterized protein Neighboring gene YGGT family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structure and expression of an asparaginyl-tRNA synthetase gene located on chromosome IV of Arabidopsis thaliana and adjacent to a novel gene of 15 exons. Aubourg S, et al. Biochim Biophys Acta, 1998 Jul 9. PMID 9655910
    2. Duplication and quadruplication of Arabidopsis thaliana cysteinyl- and asparaginyl-tRNA synthetase genes of organellar origin. Peeters NM, et al. J Mol Evol, 2000 May. PMID 10824085
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001337712.1
    NM_111621.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables aminoacyl-tRNA ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables asparagine-tRNA ligase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within asparaginyl-tRNA aminoacylation ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in tRNA aminoacylation for protein translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    asparaginyl-tRNA synthetase 2
    NP_187398.1
    • asparaginyl-tRNA synthetase 2 (NS2); CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT5G56680.1); Has 9059 Blast hits to 7126 proteins in 1951 species: Archae - 376; Bacteria - 6198; Metazoa - 478; Fungi - 585; Plants - 210; Viruses - 0; Other Eukaryotes - 1212 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      2373913..2376975 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111621.4 → NP_187398.1  asparaginyl-tRNA synthetase 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187398.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O48594, Q8GZ48, Q9SRS4, Q9SW95
      UniProtKB/TrEMBL
      A0A178VCZ7, A0A5S9XA29
      Conserved Domains (1) summary
      PLN02532
      Location:1 → 638
      PLN02532; asparagine-tRNA synthetase

    2. NM_001337712.1 → NP_001326578.1  asparaginyl-tRNA synthetase 2 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LPQ1, A0A5S9XA29
      Conserved Domains (1) summary
      PLN02532
      Location:1 → 516
      PLN02532; asparagine-tRNA synthetase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SW95.2

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