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    FLA15 FASCICLIN-like arabinogalactan protein 15 precursor [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824402, updated on 18-Sep-2024

    Summary

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    Official Symbol
    FLA15
    Official Full Name
    FASCICLIN-like arabinogalactan protein 15 precursor
    Primary source
    TAIR:AT3G52370
    Locus tag
    AT3G52370
    See related
    Araport:AT3G52370
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    FASCICLIN-like arabinogalactan protein 15 precursor
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    Genomic context

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    See FLA15 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (19417372..19419913)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene D111/G-patch domain-containing protein Neighboring gene uncharacterized protein Neighboring gene chloroplast RNA-binding protein 33 Neighboring gene TatD related DNase Neighboring gene syntaxin of plants 122

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_115097.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    FASCICLIN-like arabinogalactan protein 15 precursor
    NP_190805.1
    • FASCICLIN-like arabinogalactan protein 15 precursor (FLA15); INVOLVED IN: cell adhesion; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 16 precursor (TAIR:AT2G35860.1); Has 1194 Blast hits to 1139 proteins in 270 species: Archae - 8; Bacteria - 524; Metazoa - 184; Fungi - 15; Plants - 237; Viruses - 3; Other Eukaryotes - 223 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      19417372..19419913
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001339573.1 → NP_001325578.1  FASCICLIN-like arabinogalactan protein 15 precursor [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VAW5, A0A1I9LLN6

    2. NM_115097.3 → NP_190805.1  FASCICLIN-like arabinogalactan protein 15 precursor [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190805.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FT45
      UniProtKB/TrEMBL
      A0A178VAW5, A0A5S9XK37, A0A654FF47
      Conserved Domains (3) summary
      smart00554
      Location:290 → 395
      FAS1; Four repeated domains in the Fasciclin I family of proteins, present in many other contexts
      pfam02469
      Location:42 → 167
      Fasciclin; Fasciclin domain
      cl02663
      Location:244 → 323
      Fasciclin; Fasciclin domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FT45.1

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