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    SMAP2 small acidic protein 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822016, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SMAP2
    Official Full Name
    small acidic protein 2
    Primary source
    TAIR:AT3G24280
    Locus tag
    AT3G24280
    See related
    Araport:AT3G24280
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    small acidic protein 2
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    Genomic context

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    See SMAP2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (8798934..8799482, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene paired amphipathic helix Sin3-like protein Neighboring gene pumilio 25 Neighboring gene ammonium transporter 1;5 Neighboring gene ammonium transporter 1;3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cloning of the Arabidopsis SMAP2 promoter and analysis of its expression activity. Bao A, et al. Sci Rep, 2024 May 20. PMID 38769443, Free PMC Article
    2. A gene encoding SMALL ACIDIC PROTEIN 2 potentially mediates the response to synthetic auxin, 2,4-dichlorophenoxyacetic acid, in Arabidopsis thaliana. Nakasone A, et al. J Plant Physiol, 2009 Aug 15. PMID 19307045
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Cloning of the Arabidopsis SMAP2 promoter and analysis of its expression activity.
      Title: Cloning of the Arabidopsis SMAP2 promoter and analysis of its expression activity.
    2. SMAP2 has an ability to mediate the 2,4-dichlorophenoxyacetic acid response and is expressed only in restricted tissues.
      Title: A gene encoding SMALL ACIDIC PROTEIN 2 potentially mediates the response to synthetic auxin, 2,4-dichlorophenoxyacetic acid, in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_113334.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to auxin IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    small acidic protein 2
    NP_189071.1
    • small acidic protein 2 (SMAP2); Has 13 Blast hits to 13 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      8798934..8799482 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113334.3 → NP_189071.1  small acidic protein 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189071.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q1ECS0, Q9LK17
      UniProtKB/TrEMBL
      A0A178VC14, A0A5S9XFB1, A0A654FA64
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q1ECS0.1

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