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    Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843048, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein
    Primary source
    TAIR:AT1G67280
    Locus tag
    AT1G67280
    See related
    Araport:AT1G67280
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F1N21.10
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    9
    Sequence:
    Chromosome: 1; NC_003070.9 (25188238..25190694, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ROTUNDIFOLIA like 21 Neighboring gene Zinc-finger domain of monoamine-oxidase A repressor R1 protein Neighboring gene glyoxal oxidase-related protein Neighboring gene Major facilitator superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis thaliana Contains Both Ni2+ and Zn2+ Dependent Glyoxalase I Enzymes and Ectopic Expression of the Latter Contributes More towards Abiotic Stress Tolerance in E. coli. Jain M, et al. PLoS One, 2016. PMID 27415831, Free PMC Article
    2. The chloroplast lumen and stromal proteomes of Arabidopsis thaliana show differential sensitivity to short- and long-term exposure to low temperature. Goulas E, et al. Plant J, 2006 Sep. PMID 16923014
    3. Proteome map of the chloroplast lumen of Arabidopsis thaliana. Schubert M, et al. J Biol Chem, 2002 Mar 8. PMID 11719511
    4. High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study. Giacomelli L, et al. Plant Physiol, 2006 Jun. PMID 16648217, Free PMC Article
    5. The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. Peltier JB, et al. Mol Cell Proteomics, 2006 Jan. PMID 16207701

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001084314.2
    NM_105396.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables lactoylglutathione lyase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within response to cold IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast stroma HDA PubMed 
    located_in mitochondrion HDA PubMed 
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in stromule IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in thylakoid HDA PubMed 
    located_in thylakoid lumen HDA PubMed 

    General protein information

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    Preferred Names
    Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein
    NP_001077783.1
    • Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein; FUNCTIONS IN: lactoylglutathione lyase activity, metal ion binding; INVOLVED IN: response to cold, carbohydrate metabolic process; LOCATED IN: thylakoid, stromule, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase I (InterPro:IPR004361), Glyoxalase I, conserved site (InterPro:IPR018146), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: glyoxalase I homolog (TAIR:AT1G11840.6); Has 8895 Blast hits to 5126 proteins in 1627 species: Archae - 130; Bacteria - 5741; Metazoa - 515; Fungi - 327; Plants - 261; Viruses - 0; Other Eukaryotes - 1921 (source: NCBI BLink).
    NP_176896.1
    • Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein; FUNCTIONS IN: lactoylglutathione lyase activity, metal ion binding; INVOLVED IN: response to cold, carbohydrate metabolic process; LOCATED IN: thylakoid, thylakoid lumen, stromule, chloroplast, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase I (InterPro:IPR004361), Glyoxalase I, conserved site (InterPro:IPR018146), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: glyoxalase I homolog (TAIR:AT1G11840.6); Has 8954 Blast hits to 5185 proteins in 1641 species: Archae - 131; Bacteria - 5795; Metazoa - 515; Fungi - 329; Plants - 252; Viruses - 0; Other Eukaryotes - 1932 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      25188238..25190694 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105396.4 → NP_176896.1  Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176896.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A8MRZ1, Q8LEY7, Q8W593, Q9FYG5
      UniProtKB/TrEMBL
      A0A178W619, A0A5S9WSF4
      Conserved Domains (1) summary
      PLN02300
      Location:65 → 350
      PLN02300; lactoylglutathione lyase

    2. NM_001084314.2 → NP_001077783.1  Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077783.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8W593
      Conserved Domains (3) summary
      PLN02300
      Location:1 → 262
      PLN02300; lactoylglutathione lyase
      TIGR00068
      Location:1 → 133
      glyox_I; lactoylglutathione lyase
      cl14632
      Location:131 → 254
      Glo_EDI_BRP_like; This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8W593.1

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