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    LOC113610180 tumor necrosis factor receptor superfamily member 10B-like [ Sagmatias obliquidens (Pacific white-sided dolphin) ]

    Gene ID: 113610180, updated on 7-Jan-2025

    Summary

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    Gene symbol
    LOC113610180
    Gene description
    tumor necrosis factor receptor superfamily member 10B-like
    See related
    EnsemblRapid:ENSLOBG00000020014
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sagmatias obliquidens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Sagmatias
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    Genomic context

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    See LOC113610180 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    100 current ASM367639v1 (GCF_003676395.1) Unplaced Scaffold NW_020838005.1 (5570..111491, complement)

    NW_020838005.1Genomic Context describing neighboring genes Neighboring gene charged multivesicular body protein 7 Neighboring gene R3H domain and coiled-coil containing 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020838005 Unplaced Scaffold Reference ASM367639v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GO

    Function Evidence Code Pubs
    enables TRAIL binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in TRAIL-activated apoptotic signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell surface IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tumor necrosis factor receptor superfamily member 10A-like; tumor necrosis factor receptor superfamily member 10B-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Lagenorhynchus obliquidens Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM367639v1 Primary Assembly

    Genomic

    1. NW_020838005.1 Reference ASM367639v1 Primary Assembly

      Range
      5570..111491 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027088062.1 → XP_026943863.1  tumor necrosis factor receptor superfamily member 10A-like isoform X5

      Conserved Domains (2) summary
      cd08315
      Location:330 → 417
      Death_TRAILR_DR4_DR5; Death domain of Tumor necrosis factor-Related Apoptosis-Inducing Ligand Receptors
      cd10580
      Location:88 → 190
      TNFRSF10; Tumor necrosis factor receptor superfamily member 10 (TNFRSF10), includes TNFRSF10A (DR4), TNFRSF10B (DR5), TNFRSF10C (DcR1) and TNFRSF10D (DcR2)

    2. XM_027088059.1 → XP_026943860.1  tumor necrosis factor receptor superfamily member 10B-like isoform X2

      Conserved Domains (2) summary
      cd08315
      Location:359 → 446
      Death_TRAILR_DR4_DR5; Death domain of Tumor necrosis factor-Related Apoptosis-Inducing Ligand Receptors
      cd10580
      Location:88 → 190
      TNFRSF10; Tumor necrosis factor receptor superfamily member 10 (TNFRSF10), includes TNFRSF10A (DR4), TNFRSF10B (DR5), TNFRSF10C (DcR1) and TNFRSF10D (DcR2)

    3. XM_027088060.1 → XP_026943861.1  tumor necrosis factor receptor superfamily member 10B-like isoform X3

      Conserved Domains (2) summary
      cd08315
      Location:356 → 443
      Death_TRAILR_DR4_DR5; Death domain of Tumor necrosis factor-Related Apoptosis-Inducing Ligand Receptors
      cd10580
      Location:85 → 187
      TNFRSF10; Tumor necrosis factor receptor superfamily member 10 (TNFRSF10), includes TNFRSF10A (DR4), TNFRSF10B (DR5), TNFRSF10C (DcR1) and TNFRSF10D (DcR2)

    4. XM_027088065.1 → XP_026943866.1  tumor necrosis factor receptor superfamily member 10A-like isoform X8

      Conserved Domains (2) summary
      cd08315
      Location:248 → 335
      Death_TRAILR_DR4_DR5; Death domain of Tumor necrosis factor-Related Apoptosis-Inducing Ligand Receptors
      cl22855
      Location:22 → 79
      TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)

    5. XM_027088061.1 → XP_026943862.1  tumor necrosis factor receptor superfamily member 10A-like isoform X4

      Conserved Domains (2) summary
      cd08315
      Location:331 → 418
      Death_TRAILR_DR4_DR5; Death domain of Tumor necrosis factor-Related Apoptosis-Inducing Ligand Receptors
      cd10580
      Location:89 → 191
      TNFRSF10; Tumor necrosis factor receptor superfamily member 10 (TNFRSF10), includes TNFRSF10A (DR4), TNFRSF10B (DR5), TNFRSF10C (DcR1) and TNFRSF10D (DcR2)

    6. XM_027088058.1 → XP_026943859.1  tumor necrosis factor receptor superfamily member 10B-like isoform X1

      Related
      ENSLOBP00000026971.1, ENSLOBT00000029538.1
      Conserved Domains (2) summary
      cd08315
      Location:360 → 447
      Death_TRAILR_DR4_DR5; Death domain of Tumor necrosis factor-Related Apoptosis-Inducing Ligand Receptors
      cd10580
      Location:89 → 191
      TNFRSF10; Tumor necrosis factor receptor superfamily member 10 (TNFRSF10), includes TNFRSF10A (DR4), TNFRSF10B (DR5), TNFRSF10C (DcR1) and TNFRSF10D (DcR2)

    7. XM_027088063.1 → XP_026943864.1  tumor necrosis factor receptor superfamily member 10B-like isoform X6

      Conserved Domains (1) summary
      cd10580
      Location:89 → 191
      TNFRSF10; Tumor necrosis factor receptor superfamily member 10 (TNFRSF10), includes TNFRSF10A (DR4), TNFRSF10B (DR5), TNFRSF10C (DcR1) and TNFRSF10D (DcR2)

    8. XM_027088064.1 → XP_026943865.1  tumor necrosis factor receptor superfamily member 10B-like isoform X7

      Conserved Domains (1) summary
      cd10580
      Location:89 → 191
      TNFRSF10; Tumor necrosis factor receptor superfamily member 10 (TNFRSF10), includes TNFRSF10A (DR4), TNFRSF10B (DR5), TNFRSF10C (DcR1) and TNFRSF10D (DcR2)
    Nucleotide Protein
    Heading Accession and Version

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