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    Smox Smad on X [ Drosophila erecta ]

    Gene ID: 6550310, updated on 23-May-2024

    Summary

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    Gene symbol
    Smox
    Gene description
    Smad on X
    Locus tag
    Dere_GG17985
    See related
    EnsemblRapid:LOC6550310
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila erecta
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GG17985; GG17985-PB
    Orthologs
    fruit fly all
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    Genomic context

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    See Smox in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    101 current DereRS2 (GCF_003286155.1) Unplaced Scaffold NW_020825209.1 (7936625..7941691, complement)

    NW_020825209.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6550336 Neighboring gene dynein regulatory complex protein 1 homolog Neighboring gene zinc finger protein 239 Neighboring gene uncharacterized LOC6550311 Neighboring gene phenylalanine--tRNA ligase alpha subunit

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020825209 Unplaced Scaffold Reference DereRS2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables I-SMAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in BMP signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in SMAD protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in anatomical structure morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transforming growth factor beta receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of heteromeric SMAD protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mothers against decapentaplegic homolog 3
    Names
    Dere\GG17985
    Dere\GG17985-PB
    dere_GLEANR_2866

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila erecta Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference DereRS2

    Genomic

    1. NW_020825209.1 Reference DereRS2

      Range
      7936625..7941691 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001977862.3 → XP_001977898.2  mothers against decapentaplegic homolog 3

      UniProtKB/TrEMBL
      B3NWK5
      Related
      XP_001977898.2, XM_001977862.3
      Conserved Domains (2) summary
      cd10488
      Location:7 → 130
      MH1_R-SMAD; N-terminal Mad Homology 1 (MH1) domain of receptor regulated SMADs
      cd10985
      Location:283 → 473
      MH2_SMAD_2_3; C-terminal Mad Homology 2 (MH2) domain in SMAD2 and SMAD3

    2. XM_026982518.1 → XP_026838319.1  mothers against decapentaplegic homolog 3

      UniProtKB/TrEMBL
      B3NWK5
      Related
      XP_026838319.1, XM_026982518.1
      Conserved Domains (2) summary
      cd10488
      Location:7 → 130
      MH1_R-SMAD; N-terminal Mad Homology 1 (MH1) domain of receptor regulated SMADs
      cd10985
      Location:283 → 473
      MH2_SMAD_2_3; C-terminal Mad Homology 2 (MH2) domain in SMAD2 and SMAD3
    Nucleotide Protein
    Heading Accession and Version

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